RNA–Protein interactions for RNA: ENST00000498043.6

CHRNA4-206, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-206ENST00000498043 VPS51Q9UID3 782 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 OR51B4Q9Y5P0 310 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 E2F8A0AVK6 867 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 ZMPSTE24O75844 475 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 CD160O95971 181 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 SERPINF2P08697 491 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 ATXN1LP0C7T5 689 aaKnown RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 NRIP1P48552 1158 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 SERPINB9P50453 376 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 SCNN1BP51168 640 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 GALNT3Q14435 633 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 CYTH1Q15438 398 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 PPP2R2DQ66LE6 453 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 APCDD1Q8J025 514 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 BANPQ8N9N5 519 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 ZSWIM3Q96MP5 696 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 TLE6Q9H808 572 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 SSU72Q9NP77 194 aaKnown RBP18■□□□□ 0.47
CHRNA4-206ENST00000498043 SLC2A6Q9UGQ3 507 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 DPP7Q9UHL4 492 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 REV3LO60673 3130 aa18■□□□□ 0.47
CHRNA4-206ENST00000498043 GMNCA6NCL1 334 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 WDR4P57081 412 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 FRG1Q14331 258 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 CBX2Q14781 532 aaPredicted RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 ESRP1Q6NXG1 681 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF449Q6P9G9 518 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 DCAF4L2Q8NA75 395 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 ATP2A3Q93084 1043 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 MTBPQ96DY7 904 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 ALG14Q96F25 216 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 ATXN7L3BQ96GX2 97 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 C12orf65Q9H3J6 166 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 PIDD1Q9HB75 910 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 IARS2Q9NSE4 1012 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 LOC285095A0A1B0GVY8 99 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 NDUFAB1O14561 156 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 CDK18Q07002 472 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 LMAN2Q12907 356 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 TMC5Q6UXY8 1006 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 PTCD2Q8WV60 388 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 SMG7Q92540 1137 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 SGSM3Q96HU1 749 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 APOPT1Q96IL0 206 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 FEM1CQ96JP0 617 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 NSMCE3Q96MG7 304 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 SCUBE2Q9NQ36 999 aa17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 MRPS23Q9Y3D9 190 aaKnown RBP17.99■□□□□ 0.47
CHRNA4-206ENST00000498043 RFPL1O75677 317 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 CYBBP04839 570 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 PRKCGP05129 697 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 ADRA1DP25100 572 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 CD70P32970 193 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 GP5P40197 560 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 MPP7Q5T2T1 576 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 TEDDM1Q5T9Z0 273 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 FYB2Q5VWT5 728 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 PDPK2PQ6A1A2 396 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 ELMSAN1Q6PJG2 1045 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 MICALCLQ6ZW33 695 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 STRA8Q7Z7C7 330 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 TCP10LQ8TDR4 215 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 DENND1AQ8TEH3 1009 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 ALKBH8Q96BT7 664 aaKnown RBP17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 CPNE1Q99829 537 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 CCDC134Q9H6E4 229 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 MRM3Q9HC36 420 aaKnown RBP17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 PCMTD2Q9NV79 361 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 PRKAG3Q9UGI9 489 aa17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 FCF1Q9Y324 198 aaKnown RBP17.98■□□□□ 0.47
CHRNA4-206ENST00000498043 PDE4DIPQ5VU43 2346 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 C2orf16Q68DN1 1984 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 HEATR9A2RTY3 570 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 EPOPA6NHQ4 379 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 SRRM3A6NNA2 597 aaPredicted RBP17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 INSIG1O15503 277 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ZWINTO95229 277 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 VAPBO95292 243 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ITGA2BP08514 1039 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CR2P20023 1033 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CNTFP26441 200 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ABCG1P45844 678 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ZNF77Q15935 545 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 SH2D5Q6ZV89 423 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ITFG1Q8TB96 612 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CHMP6Q96FZ7 201 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CCT8L2Q96SF2 557 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 C2orf49Q9BVC5 232 aaPredicted RBP17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 TREX1Q9NSU2 369 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 SLC17A7Q9P2U7 560 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ANKRD36A6QL64 1941 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CCDC85CA6NKD9 419 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 K7ERQ8 282 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ASMTLO95671 621 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 MT-CO1P00395 513 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 HLA-DPA1P20036 260 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 ARNTP27540 789 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 SLC18A1P54219 525 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 SLC18A2Q05940 514 aa17.97■□□□□ 0.47
CHRNA4-206ENST00000498043 CNGA3Q16281 694 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms