RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	AP1G1	O43747	822 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	KRT18	P05783	430 aa	Known RBP	10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CD1C	P29017	333 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CHRNA3	P32297	505 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	EIF4A3	P38919	411 aa	Known RBP	10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	OR1D5	P58170	312 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	DLG2	Q15700	870 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	PLEKHN1	Q494U1	663 aa	Predicted RBP	10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	RAB41	Q5JT25	222 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	NADSYN1	Q6IA69	706 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	BHLHA9	Q7RTU4	235 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	ZGRF1	Q86YA3	2104 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	UNC45B	Q8IWX7	931 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	THAP4	Q8WY91	577 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CYFIP2	Q96F07	1278 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CDK5RAP3	Q96JB5	506 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	RBM15	Q96T37	977 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CTRC	Q99895	268 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	DPYSL5	Q9BPU6	564 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	HMGXB4	Q9UGU5	601 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	FADS3	Q9Y5Q0	445 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CYP46A1	Q9Y6A2	500 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	PRRC2A	P48634	2157 aa	Known RBP	10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	CHD5	Q8TDI0	1954 aa		10.83	□□□□□ -0.68
RNF25-206	ENST00000497832	ANK2	Q01484	3957 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	PIPSL	A2A3N6	862 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	RASGRP1	O95267	797 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	STS	P08842	583 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	IGFALS	P35858	605 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	STAT1	P42224	750 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	CCL11	P51671	97 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	PPP2R2A	P63151	447 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	DPYD	Q12882	1025 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	TRPC3	Q13507	836 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	ALG11	Q2TAA5	492 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	ACCSL	Q4AC99	568 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	CPZ	Q66K79	652 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	PM20D1	Q6GTS8	502 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	ZNF517	Q6ZMY9	492 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	CBWD2	Q8IUF1	395 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	HID1	Q8IV36	788 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	SEC14L1	Q92503	715 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	NDRG1	Q92597	394 aa	Known RBP	10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	DDX50	Q9BQ39	737 aa	Known RBP	10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	DUSP16	Q9BY84	665 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	UBXN6	Q9BZV1	441 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	FOXP1	Q9H334	677 aa	Predicted RBP	10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	ACSS2	Q9NR19	701 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	FOXD4L1	Q9NU39	408 aa		10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	COPG1	Q9Y678	874 aa	Known RBP	10.82	□□□□□ -0.68
RNF25-206	ENST00000497832	IGLON5	A6NGN9	336 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	RNF103	O00237	685 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	MSI1	O43347	362 aa	Known RBP	10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	WIPF1	O43516	503 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	F9	P00740	461 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	PRNP	P04156	253 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	ADRB3	P13945	408 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	TNNI1	P19237	187 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	NOP2	P46087	812 aa	Known RBP	10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	NEK3	P51956	506 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	ZNF667	Q5HYK9	610 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	MS4A13	Q5J8X5	152 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	SLC47A2	Q86VL8	602 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	FJX1	Q86VR8	437 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	C17orf82	Q86X59	251 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	SFTPA2	Q8IWL1	248 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	SH2D3C	Q8N5H7	860 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	RNF139	Q8WU17	664 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	RNF34	Q969K3	372 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	RELT	Q969Z4	430 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	PPP1R16A	Q96I34	528 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	ING2	Q9H160	280 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	BLOC1S4	Q9NUP1	217 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	PDP2	Q9P2J9	529 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	SLC25A13	Q9UJS0	675 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	NEU2	Q9Y3R4	380 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	FARP1	Q9Y4F1	1045 aa	Predicted RBP	10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	MYO7B	Q6PIF6	2116 aa		10.81	□□□□□ -0.68
RNF25-206	ENST00000497832	SLC26A4	O43511	780 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	KATNA1	O75449	491 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	DLAT	P10515	647 aa	Known RBP	10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	IDE	P14735	1019 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	TRIM21	P19474	475 aa	Known RBP	10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	ALDH4A1	P30038	563 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	GPR3	P46089	330 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	PEX5	P50542	639 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	TLE4	Q04727	773 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	CHAF1B	Q13112	559 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	ZNF235	Q14590	738 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	TCEA2	Q15560	299 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	EFHC1	Q5JVL4	640 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	SCARA5	Q6ZMJ2	495 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	BIVM	Q86UB2	503 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	SYCP3	Q8IZU3	236 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	CFAP52	Q8N1V2	620 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	FAM46D	Q8NEK8	389 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	OR2A12	Q8NGT7	310 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	ZNF516	Q92618	1163 aa		10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	TSACC	Q96A04	125 aa	Predicted RBP	10.8	□□□□□ -0.68
RNF25-206	ENST00000497832	CCDC114	Q96M63	670 aa		10.8	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms