RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 NMT1P30419 496 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 TLX1P31314 330 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 DPP6P42658 865 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PCYT1AP49585 367 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 STAT2P52630 851 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 HUNKP57058 714 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 EIF3EP60228 445 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 IL2P60568 153 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ARHGAP8P85298 464 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 RELAQ04206 551 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SEMA5AQ13591 1074 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 RCN2Q14257 317 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ACCSLQ4AC99 568 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC58Q4VC31 144 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 LACTB2Q53H82 288 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SLFN13Q68D06 897 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PTRHD1Q6GMV3 140 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PGBD2Q6P3X8 592 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 MARK2Q7KZI7 788 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 LRRTM4Q86VH4 590 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 MIB1Q86YT6 1006 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC43A2Q8N370 569 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 LIX1Q8N485 282 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 DPP10Q8N608 796 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CNBD1Q8NA66 436 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 MARCH10Q8NA82 808 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 HIPK4Q8NE63 616 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 LINS1Q8NG48 757 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 AFG1LQ8WV93 481 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPRN2Q92932 1015 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 EXT2Q93063 718 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PTP4A1Q93096 173 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 AZIN2Q96A70 460 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF669Q96BR6 464 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 PEX11GQ96HA9 241 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF570Q96NI8 536 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM111AQ96PZ2 611 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 RIT2Q99578 217 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CCM2Q9BSQ5 444 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 C11orf84Q9BUA3 381 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 TDRD1Q9BXT4 1180 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SENP6Q9GZR1 1112 aaPredicted RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 AP5M1Q9H0R1 490 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 WNT8AQ9H1J5 351 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 OR10A4Q9H209 315 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNN2Q9H2S1 579 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 OR51B5Q9H339 312 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CUEDC2Q9H467 287 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ZCCHC4Q9H5U6 513 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SERINC1Q9NRX5 453 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 BTBD7Q9P203 1132 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CYB5R1Q9UHQ9 305 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 CAPN11Q9UMQ6 739 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 SRPK3Q9UPE1 567 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 AURKCQ9UQB9 309 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ENTPD4Q9Y227 616 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 APOBEC2Q9Y235 224 aaKnown RBP3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ERGIC3Q9Y282 383 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 DTX4Q9Y2E6 619 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 FPGT-TNNI3KV9GXZ4 949 aa3.16□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD36BQ8N2N9 1353 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 LOC100506127A0A0U1RQW1 187 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 TMEM120BA0PK00 339 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF891A8MT65 544 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 H0Y858 1186 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 H0YJX3 145 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 H3BQF6 201 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 MAN2B1O00754 1011 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SCDO00767 359 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 MAP2K7O14733 419 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 RASGRF2O14827 1237 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 BET1O15155 118 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SHOX2O60902 331 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PSIP1O75475 530 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 RECQL4O94761 1208 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SEMA3DO95025 777 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PGM3O95394 542 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ANP32DO95626 131 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 GGPS1O95749 300 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CAPN1P07384 714 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ACAA1P09110 424 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT3P12035 628 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 GFAPP14136 432 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 VEGFAP15692 232 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 NPR1P16066 1061 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPN1P18031 435 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CYP3A5P20815 502 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CCNE1P24864 410 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 GNA11P29992 359 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PDIA3P30101 505 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 SHMT1P34896 483 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 PHBP35232 272 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 RFC1P35251 1148 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 TAGLN2P37802 199 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ACAA2P42765 397 aaKnown RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 RAP1GDS1P52306 607 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF135P52742 658 aaPredicted RBP3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 CASP9P55211 416 aa3.15□□□□□ -1.9
SNRNP48-202ENST00000496946 STX17P56962 302 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms