RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ADPRHL2Q9NX46 363 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 TAB2Q9NYJ8 693 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 RABL2AQ9UBK7 228 aaPredicted RBP3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 MOSPD1Q9UJG1 213 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 CA14Q9ULX7 337 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 CAPN11Q9UMQ6 739 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 CNTN6Q9UQ52 1028 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 ZNF541Q9H0D2 1346 aa3.87□□□□□ -1.79
EXOSC3-208ENST00000496910 GRID2IPA4D2P6 1211 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 URADA6NGE7 173 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 UNC119BA6NIH7 251 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 POLRMTO00411 1230 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 DHHO43323 396 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 TNFSF14O43557 240 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 KINO60870 393 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ERN1O75460 977 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 STAM2O75886 525 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 CDKL5O76039 1030 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 CSPG5O95196 566 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 C22orf31O95567 290 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GNAI2P04899 355 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 EGR2P11161 476 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 RARGP13631 454 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 LAG3P18627 525 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 KRT4P19013 534 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 HLA-DPA1P20036 260 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 CHRM3P20309 590 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GATA3P23771 443 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 NFKBIAP25963 317 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 EEF1DP29692 281 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GP5P40197 560 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 CSE1LP55060 971 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 PIGFQ07326 219 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ZNF844Q08AG5 666 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MYO1EQ12965 1108 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 DYRK1AQ13627 763 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 TNFAIP1Q13829 316 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SLC29A2Q14542 456 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 KCNAB1Q14722 419 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 RPS6KA2Q15349 733 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MED22Q15528 200 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ZIK1Q3SY52 487 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SLC9C1Q4G0N8 1177 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 AKNAD1Q5T1N1 836 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MPP7Q5T2T1 576 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 FAXCQ5TGI0 409 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SP5Q6BEB4 398 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MRNIPQ6NTE8 343 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 RINT1Q6NUQ1 792 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 CAVIN1Q6NZI2 390 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 C11orf88Q6PI97 169 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GAS2L3Q86XJ1 694 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 RASGRP3Q8IV61 690 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 TBC1D21Q8IYX1 336 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 FRMD1Q8N878 549 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 LINS1Q8NG48 757 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GABPB2Q8TAK5 448 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SMCR8Q8TEV9 937 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 GRK7Q8WTQ7 553 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SCFD2Q8WU76 684 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 DEPDC1BQ8WUY9 529 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SLC22A18Q96BI1 424 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 PPP1R13BQ96KQ4 1090 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 AK8Q96MA6 479 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 NR1H4Q96RI1 486 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ATP6V0BQ99437 205 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 THUMPD3Q9BV44 507 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 APOL6Q9BWW8 343 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 TRIM5Q9C035 493 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 KLHL4Q9C0H6 718 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MMADHCQ9H3L0 296 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 R3HDMLQ9H3Y0 253 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SEMA4BQ9NPR2 832 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 COMMD8Q9NX08 183 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SYBUQ9NX95 663 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MCM9Q9NXL9 1143 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 SELENONQ9NZV5 590 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 XPR1Q9UBH6 696 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 EPN1Q9Y6I3 576 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 C5P01031 1676 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ALS2Q96Q42 1657 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 EP300Q09472 2414 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 RNF123Q5XPI4 1314 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 ARHGAP31Q2M1Z3 1444 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 FER1L6Q2WGJ9 1857 aa3.86□□□□□ -1.79
EXOSC3-208ENST00000496910 MON2Q7Z3U7 1717 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 RGPD8O14715 1765 aaPredicted RBP3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 OR2W5A6NFC9 320 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 H7C4K7 107 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 J3KTA2 159 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 PEX12O00623 359 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 KERAO60938 352 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 VPS4BO75351 444 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 PDE8BO95263 885 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 APBB3O95704 486 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 GGPS1O95749 300 aa3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 DLDP09622 509 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-208ENST00000496910 TMIGD3P0DMS9 266 aaPredicted RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms