RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 MBD3O95983 291 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 ALPPL2P10696 532 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 RHOAP61586 193 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 TYRO3Q06418 890 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 FZD2Q14332 565 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 ACAD10Q6JQN1 1059 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 GDPD4Q6W3E5 623 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 KDM7AQ6ZMT4 941 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 PDZD3Q86UT5 571 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 DCP2Q8IU60 420 aaKnown RBP13.14□□□□□ -0.31
FN1-226ENST00000496542 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 RAB7BQ96AH8 199 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 HMCESQ96FZ2 354 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 LRIG1Q96JA1 1093 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 DCBLD2Q96PD2 775 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 CNPY3Q9BT09 278 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 C1QTNF2Q9BXJ5 285 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 OSBPL1AQ9BXW6 950 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 IPO11Q9UI26 975 aaKnown RBP13.14□□□□□ -0.31
FN1-226ENST00000496542 FZD10Q9ULW2 581 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 RP1P56715 2156 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 LRRC10BA6NIK2 292 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 TMCO5BA8MYB1 307 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 FPGTO14772 594 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 ATMINO43313 823 aaPredicted RBP13.13□□□□□ -0.31
FN1-226ENST00000496542 NEBLO76041 1014 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 IGSF6O95976 241 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 MYF5P13349 255 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 DESP17661 470 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 RABIFP47224 123 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 HNRNPKP61978 463 aaKnown RBP eCLIP13.13□□□□□ -0.31
FN1-226ENST00000496542 INSM1Q01101 510 aaPredicted RBP13.13□□□□□ -0.31
FN1-226ENST00000496542 SEMG2Q02383 582 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 RAD51Q06609 339 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 PDE1CQ14123 709 aaPredicted RBP13.13□□□□□ -0.31
FN1-226ENST00000496542 PPP1R15BQ5SWA1 713 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 PARGQ86W56 976 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
FN1-226ENST00000496542 BAP1Q92560 729 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 ARHGEF26Q96DR7 871 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 IFT43Q96FT9 208 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 EXOC2Q96KP1 924 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 CATSPERBQ9H7T0 1116 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 GPR27Q9NS67 375 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 TAS2R14Q9NYV8 317 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 NLGN3Q9NZ94 848 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 CLCA2Q9UQC9 943 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 LOC400499M0QZD8 3231 aa13.13□□□□□ -0.31
FN1-226ENST00000496542 LRRK1Q38SD2 2015 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 SPTY2D1-AS1A0A0U1RR47 76 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 NEMP2A6NFY4 417 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 H3BM21 787 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 TEX33O43247 280 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 MMP20O60882 483 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 GIMD1P0DJR0 217 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 CKMT1AP12532 417 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 NME1P15531 152 aaKnown RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 TNFAIP3P21580 790 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 AIF1P55008 147 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 YBEYP58557 167 aaPredicted RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 TPI1P60174 286 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 E2F1Q01094 437 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 OGDHQ02218 1023 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 SERINC3Q13530 473 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 PARP15Q460N3 678 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 ANO6Q4KMQ2 910 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 TPRG1LQ5T0D9 272 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 TTC7BQ86TV6 843 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 VPS36Q86VN1 386 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 DENND6BQ8NEG7 585 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 CXorf40AQ8TE69 158 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 CASKIN2Q8WXE0 1202 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 RFFLQ8WZ73 363 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 VOPP1Q96AW1 172 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 APOLD1Q96LR9 279 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 LENG8Q96PV6 779 aaPredicted RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 KLF6Q99612 283 aaPredicted RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 NCAPGQ9BPX3 1015 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 TTYH3Q9C0H2 523 aa13.12□□□□□ -0.31
FN1-226ENST00000496542 NAT10Q9H0A0 1025 aaKnown RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 UBA2Q9UBT2 640 aaPredicted RBP13.12□□□□□ -0.31
FN1-226ENST00000496542 LRRC53A6NM62 1247 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 WASH4PA8MWX3 477 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 K7ESM1 405 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 AREL1O15033 823 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 SCAMP1O15126 338 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 INSIG1O15503 277 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 MT-CO3P00414 261 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 CSF2P04141 144 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 JUNDP17535 347 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 ITIH2P19823 946 aa13.11□□□□□ -0.31
FN1-226ENST00000496542 XPAP23025 273 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms