RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 RFTN1Q14699 578 aaPredicted RBP17.29■□□□□ 0.36
COMMD3-214ENST00000496071 CYTH1Q15438 398 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 SMTNL2Q2TAL5 461 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 ZNF284Q2VY69 593 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 ATXN7L2Q5T6C5 722 aaPredicted RBP17.29■□□□□ 0.36
COMMD3-214ENST00000496071 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 HCAR2Q8TDS4 363 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 RHBDD1Q8TEB9 315 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 BTBD6Q96KE9 485 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 CCDC42Q96M95 316 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 KLHL32Q96NJ5 620 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.29■□□□□ 0.36
COMMD3-214ENST00000496071 LHX3Q9UBR4 397 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 PCOLCE2Q9UKZ9 415 aa17.29■□□□□ 0.36
COMMD3-214ENST00000496071 SPAARA0A1B0GVQ0 90 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 DFFAO00273 331 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 SLC31A1O15431 190 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 PALMO75781 387 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TRIM16O95361 564 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TMEM253P0C7T8 217 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TCF4P15884 667 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 HNRNPA2B1P22626 353 aaKnown RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 SSR1P43307 286 aaKnown RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 CSNK1DP48730 415 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 ARRB1P49407 418 aaPredicted RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 ADKP55263 362 aaKnown RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 NXPH1P58417 271 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 SLC25A11Q02978 314 aaKnown RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 IL10RBQ08334 325 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 INAVAQ3KP66 663 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TMEM259Q4ZIN3 620 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TMCO3Q6UWJ1 677 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 GLRX5Q86SX6 157 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 ARHGAP12Q8IWW6 846 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TMEM145Q8NBT3 493 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 KLHDC7BQ96G42 594 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 CAMK1GQ96NX5 476 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 CDC6Q99741 560 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TRIM5Q9C035 493 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 SP110Q9HB58 689 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 RCOR3Q9P2K3 495 aaPredicted RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 DKK3Q9UBP4 350 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 ZFR2Q9UPR6 939 aaKnown RBP17.28■□□□□ 0.36
COMMD3-214ENST00000496071 TRPM6Q9BX84 2022 aa17.28■□□□□ 0.36
COMMD3-214ENST00000496071 AKR1B15C9JRZ8 316 aaPredicted RBP17.27■□□□□ 0.36
COMMD3-214ENST00000496071 NEMP1O14524 444 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 CBFA2T3O75081 653 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 PROSCO94903 275 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 AMPD1P23109 780 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 SERPINB6P35237 376 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 GRK6P43250 576 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 SUOXP51687 545 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 KRT81Q14533 505 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 TMCO4Q5TGY1 634 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 TTC7BQ86TV6 843 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 NPWQ8N729 165 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 ASB12Q8WXK4 309 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 KLK6Q92876 244 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 VOPP1Q96AW1 172 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 ZNF599Q96NL3 588 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 CSPG4P5Q96PW8 444 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 CHP1Q99653 195 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 SLC17A9Q9BYT1 436 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 NHEJ1Q9H9Q4 299 aaPredicted RBP17.27■□□□□ 0.36
COMMD3-214ENST00000496071 PCDH18Q9HCL0 1135 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 IPO11Q9UI26 975 aaKnown RBP17.27■□□□□ 0.36
COMMD3-214ENST00000496071 HS3ST3A1Q9Y663 406 aa17.27■□□□□ 0.36
COMMD3-214ENST00000496071 NCOR2Q9Y618 2525 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 KNL1Q8NG31 2342 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 PRLRP16471 622 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 ABL2P42684 1182 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 RXRGP48443 463 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 RENBPP51606 427 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 CDH6P55285 790 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 FAM193AP78312 1265 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 NSUN2Q08J23 767 aaKnown RBP eCLIP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 FOXC1Q12948 553 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 TBX2Q13207 712 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 SGCGQ13326 291 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 SEL1L3Q68CR1 1132 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 TXNRD3NBQ6F5E7 133 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 DCP2Q8IU60 420 aaKnown RBP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 NETO2Q8NC67 525 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 FAM71BQ8TC56 605 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 ZNF641Q96N77 438 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 TUBGCP5Q96RT8 1024 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 CINPQ9BW66 212 aaPredicted RBP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 PACSIN1Q9BY11 444 aa17.26■□□□□ 0.35
COMMD3-214ENST00000496071 APOBEC2Q9Y235 224 aaKnown RBP17.26■□□□□ 0.35
COMMD3-214ENST00000496071 AREL1O15033 823 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 PAK4O96013 591 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-214ENST00000496071 ITGAVP06756 1048 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 KRT7P08729 469 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 THEGLP0DJG4 465 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 XPAP23025 273 aaPredicted RBP17.25■□□□□ 0.35
COMMD3-214ENST00000496071 MAN1A1P33908 653 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 PDK2Q15119 407 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 SRLQ86TD4 932 aa17.25■□□□□ 0.35
COMMD3-214ENST00000496071 SPATS2Q86XZ4 545 aaKnown RBP17.25■□□□□ 0.35
COMMD3-214ENST00000496071 MAP7D3Q8IWC1 876 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms