RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 LRRK2Q5S007 2527 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 SYNJ2BP-COX16A0A087WUM0 186 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 ALPIP09923 528 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 PNLIPP16233 465 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 CR2P20023 1033 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 EIF4A3P38919 411 aaKnown RBP13.66□□□□□ -0.22
COL1A1-209ENST00000495677 PEX5P50542 639 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 CCNHP51946 323 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-209ENST00000495677 CCL7P80098 99 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 PPARDQ03181 441 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 PDCLQ13371 301 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 ARTNQ5T4W7 220 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 FAXCQ5TGI0 409 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 LINGO4Q6UY18 593 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 WDTC1Q8N5D0 677 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF397Q8NF99 534 aaPredicted RBP13.66□□□□□ -0.22
COL1A1-209ENST00000495677 SNX21Q969T3 373 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 CEP63Q96MT8 703 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 FUCA2Q9BTY2 467 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 WDCPQ9H6R7 721 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 COX16Q9P0S2 106 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 TUBD1Q9UJT1 453 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 APPL1Q9UKG1 709 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 PCDHB11Q9Y5F2 797 aa13.66□□□□□ -0.22
COL1A1-209ENST00000495677 NBPF19A0A087WUL8 3843 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 USP9YO00507 2555 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-209ENST00000495677 C16orf96A6NNT2 1141 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 TMEM110-MUSTN1A8MSY1 372 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 AREL1O15033 823 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 LETM1O95202 739 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-209ENST00000495677 HGFP14210 728 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 OR1E1P30953 314 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 IGFALSP35858 605 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 GGCXP38435 758 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 ABL2P42684 1182 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 CXCR3P49682 368 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 HK3P52790 923 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 NME3Q13232 169 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 CLCA4Q14CN2 919 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF805Q5CZA5 627 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 LRRC31Q6UY01 552 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 SLC26A9Q7LBE3 791 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 GPR156Q8NFN8 814 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 SPATA20Q8TB22 786 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF564Q8TBZ8 553 aaPredicted RBP13.65□□□□□ -0.22
COL1A1-209ENST00000495677 HTR3CQ8WXA8 447 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 NT5C3BQ969T7 300 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 CCDC74AQ96AQ1 378 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 VOPP1Q96AW1 172 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 PPP1R13BQ96KQ4 1090 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 CPXM1Q96SM3 734 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 NPY6RQ99463 290 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 CMKLR1Q99788 373 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 EPAS1Q99814 870 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 SLC12A9Q9BXP2 914 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 EDEM3Q9BZQ6 932 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 FOXP3Q9BZS1 431 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF212Q9UDV6 495 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 PISDQ9UG56 409 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 DOLKQ9UPQ8 538 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 LOXL2Q9Y4K0 774 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 ICE1Q9Y2F5 2266 aa13.65□□□□□ -0.22
COL1A1-209ENST00000495677 TRIM49BA6NDI0 452 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 I6L893 689 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 ADCY5O95622 1261 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 CD160O95971 181 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 F9P00740 461 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 RPLP0P05388 317 aaKnown RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 GLB1P16278 677 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 WT1P19544 449 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 GNA15P30679 374 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 KRT85P78386 507 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 ARF5P84085 180 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 FOXK1P85037 733 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PKP1Q13835 747 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 FOXR2Q6PJQ5 311 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 OGFOD3Q6PK18 319 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 OLFML1Q6UWY5 402 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 C11orf57Q6ZUT1 292 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 ENOSF1Q7L5Y1 443 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 GKN2Q86XP6 184 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 OR7D4Q8NG98 312 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PSMG3-AS1Q96PY0 264 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 C1QTNF7Q9BXJ2 289 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 CPEB1Q9BZB8 566 aaKnown RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 TKTL2Q9H0I9 626 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 ANLNQ9NQW6 1124 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PIGVQ9NUD9 493 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 HECAQ9UBI9 543 aaPredicted RBP13.64□□□□□ -0.23
COL1A1-209ENST00000495677 GULP1Q9UBP9 304 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 ANAPC2Q9UJX6 822 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PCDHGC3Q9UN70 934 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
COL1A1-209ENST00000495677 PRAMEF33A0A0G2JMD5 474 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 C9orf172C9J069 976 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 NEMP1O14524 444 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 THAP12O43422 761 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 PRAMEF10O60809 474 aa13.63□□□□□ -0.23
COL1A1-209ENST00000495677 DAB1O75553 588 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms