RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SLC9A4Q6AI14 798 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 SLC23A3Q6PIS1 610 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 ERN2Q76MJ5 926 aaKnown RBP17.36■□□□□ 0.37
SNX17-209ENST00000494893 VSIG1Q86XK7 387 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 SLC35F6Q8N357 371 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 PGBD5Q8N414 524 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 ZCCHC9Q8N567 271 aaKnown RBP17.36■□□□□ 0.37
SNX17-209ENST00000494893 LRRC57Q8N9N7 239 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 RNF25Q96BH1 459 aaPredicted RBP17.36■□□□□ 0.37
SNX17-209ENST00000494893 ZNF599Q96NL3 588 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 DTLQ9NZJ0 730 aa17.36■□□□□ 0.37
SNX17-209ENST00000494893 GRID2IPA4D2P6 1211 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 LRRC72A6NJI9 287 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 PSTPIP1O43586 416 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 PALMO75781 387 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 ABL2P42684 1182 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 CCR5P51681 352 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 BNC1Q01954 994 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 RFTN1Q14699 578 aaPredicted RBP17.35■□□□□ 0.37
SNX17-209ENST00000494893 LBRQ14739 615 aaKnown RBP17.35■□□□□ 0.37
SNX17-209ENST00000494893 DUOXA1Q1HG43 343 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 ZFYVE27Q5T4F4 411 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 TMCO4Q5TGY1 634 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 DAAM2Q86T65 1068 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 ATPAF2Q8N5M1 289 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 SNX19Q92543 992 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 LRIG1Q96JA1 1093 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 KLHL32Q96NJ5 620 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 WDR24Q96S15 920 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 DDX56Q9NY93 547 aaKnown RBP17.35■□□□□ 0.37
SNX17-209ENST00000494893 PCDH15Q96QU1 1955 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 GON4LQ3T8J9 2241 aa17.35■□□□□ 0.37
SNX17-209ENST00000494893 TTC24A2A3L6 582 aaPredicted RBP17.34■□□□□ 0.37
SNX17-209ENST00000494893 C16orf96A6NNT2 1141 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 WNT9AO14904 365 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 KHNYNO15037 678 aaKnown RBP17.34■□□□□ 0.37
SNX17-209ENST00000494893 LATO43561 262 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 PIGNO95427 931 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 SERPINF2P08697 491 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 ADRB3P13945 408 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 GARSP41250 739 aaKnown RBP17.34■□□□□ 0.37
SNX17-209ENST00000494893 DPP6P42658 865 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 CDKN2BP42772 138 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 CSNK1DP48730 415 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 NEK3P51956 506 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 LMNB2Q03252 620 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 ADCY2Q08462 1091 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 ZNF805Q5CZA5 627 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 NPNTQ6UXI9 565 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 GDPD4Q6W3E5 623 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 SYT10Q6XYQ8 523 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 SRLQ86TD4 932 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 ZSWIM9Q86XI8 627 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 KATNAL2Q8IYT4 538 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 SYCE1Q8N0S2 351 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 PSKH2Q96QS6 385 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 CPEB1Q9BZB8 566 aaKnown RBP17.34■□□□□ 0.37
SNX17-209ENST00000494893 MIR1-1HGQ9H1L0 117 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 KDM4CQ9H3R0 1056 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 TM9SF3Q9HD45 589 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 SLC6A14Q9UN76 642 aa17.34■□□□□ 0.37
SNX17-209ENST00000494893 ZFR2Q9UPR6 939 aaKnown RBP17.34■□□□□ 0.37
SNX17-209ENST00000494893 CEP250Q9BV73 2442 aa17.33■□□□□ 0.37
SNX17-209ENST00000494893 TBC1D3DA0A087WVF3 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3IA0A087WXS9 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3EA0A087X179 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3KA0A087X1G2 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 A0A1W2PPC4 97 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3FA6NER0 549 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3LB9A6J9 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 CDX4O14627 284 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 CFIP05156 583 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3HP0C7X1 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 KRT10P13645 584 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 ITIH2P19823 946 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 CR2P20023 1033 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 CD27P26842 260 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 LLGL1Q15334 1064 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 AASDHQ4L235 1098 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 FAM182AQ5T1J6 154 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3GQ6DHY5 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3CQ6IPX1 549 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 LAYNQ6UX15 382 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 SPOCD1Q6ZMY3 1216 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TRIM69Q86WT6 500 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TBC1D3Q8IZP1 549 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 TEX26Q8N6G2 289 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 C12orf50Q8NA57 414 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 CEP76Q8TAP6 659 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 MAML1Q92585 1016 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 RMDN1Q96DB5 314 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 PPP1R16AQ96I34 528 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 TSGA13Q96PP4 275 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 HERPUD2Q9BSE4 406 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 EDEM2Q9BV94 578 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 CINPQ9BW66 212 aaPredicted RBP17.33■□□□□ 0.36
SNX17-209ENST00000494893 OSBPL1AQ9BXW6 950 aa17.33■□□□□ 0.36
SNX17-209ENST00000494893 PREBQ9HCU5 417 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms