RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 FAM45BPQ6NSW5 357 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 RWDD4Q6NW29 188 aaKnown RBP15.52■□□□□ 0.08
SDF4-207ENST00000494748 FAM45AQ8TCE6 357 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 APOL2Q9BQE5 337 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 R3HDMLQ9H3Y0 253 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 MEAF6Q9HAF1 191 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 SETD4Q9NVD3 440 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 NRP1O14786 923 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 TPH1P17752 444 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 PSMD7P51665 324 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 RELAQ04206 551 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 SLC12A1Q13621 1099 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 SLC25A52Q3SY17 297 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 NANOGP8Q6NSW7 305 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 EEPD1Q7L9B9 569 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 RNF169Q8NCN4 708 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 ZNF711Q9Y462 761 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 TLL2Q9Y6L7 1015 aa15.52■□□□□ 0.08
SDF4-207ENST00000494748 A0A087WXM4 84 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 C22orf31O95567 290 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 TNFAIP2Q03169 654 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 EML3Q32P44 896 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 SLC36A3Q495N2 470 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 DCDC5Q6ZRR9 648 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 FASTKD5Q7L8L6 764 aaKnown RBP15.52■□□□□ 0.07
SDF4-207ENST00000494748 DEFB106AQ8N104 65 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 NPWQ8N729 165 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 SCYL1Q96KG9 808 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 SLC39A3Q9BRY0 314 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 NAA50Q9GZZ1 169 aaKnown RBP15.52■□□□□ 0.07
SDF4-207ENST00000494748 GBA3Q9H227 469 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 LRRC4Q9HBW1 653 aa15.52■□□□□ 0.07
SDF4-207ENST00000494748 KLHL8Q9P2G9 620 aaPredicted RBP15.52■□□□□ 0.07
SDF4-207ENST00000494748 TRPC5OSA6NMA1 111 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 CBFA2T3O75081 653 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 FUCA1P04066 466 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 UGT1A6P19224 532 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 DNAJB1P25685 340 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 YBX1P67809 324 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 SQLEQ14534 574 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 USP10Q14694 798 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 SLC44A4Q53GD3 710 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 INTS11Q5TA45 600 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 CHST13Q8NET6 341 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 VPS50Q96JG6 964 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 UNKQ9C0B0 810 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 TNS1Q9HBL0 1735 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 TGFB3P10600 412 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 HNRNPLP14866 589 aaKnown RBP eCLIP15.51■□□□□ 0.07
SDF4-207ENST00000494748 SAT1P21673 171 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 CCR3P51677 355 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 BST2Q10589 180 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 FASTKQ14296 549 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 PITRM1Q5JRX3 1037 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 FGD3Q5JSP0 725 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 IFNLR1Q8IU57 520 aaPredicted RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 LRCH3Q96II8 777 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 COX4I2Q96KJ9 171 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 ZMAT2Q96NC0 199 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 TCF12Q99081 682 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 MRPL40Q9NQ50 206 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 TLK1Q9UKI8 766 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 A0A087WZ62 844 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 NEMP2A6NFY4 417 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 IDO1P14902 403 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 KCNA5P22460 613 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 ARNTP27540 789 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 SULT1E1P49888 294 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 PRAMEP78395 509 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 PPIL2Q13356 520 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 ZNF829Q3KNS6 432 aaPredicted RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 AARS2Q5JTZ9 985 aaKnown RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 HACD2Q6Y1H2 254 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 CNTN4Q8IWV2 1026 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 CBR4Q8N4T8 237 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 LINC01465Q8N7H1 131 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 DNAAF3Q8N9W5 541 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 OR9I1Q8NGQ6 314 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 PPP1R16BQ96T49 567 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 FDXACB1Q9BRP7 624 aaPredicted RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 AGPAT4Q9NRZ5 378 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 CCM2LQ9NUG4 571 aaPredicted RBP15.51■□□□□ 0.07
SDF4-207ENST00000494748 CCDC167Q9P0B6 97 aa15.51■□□□□ 0.07
SDF4-207ENST00000494748 ACOX3O15254 700 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 ACADVLP49748 655 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 DNAJB13P59910 316 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 STX5Q13190 355 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 SEMA3BQ13214 749 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 BTG3Q14201 252 aaPredicted RBP15.5■□□□□ 0.07
SDF4-207ENST00000494748 RAB39AQ14964 217 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 AGKQ53H12 422 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 FUNDC1Q8IVP5 155 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 EXOC8Q8IYI6 725 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 PACRGLQ8N7B6 248 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 CCNYL1Q8N7R7 359 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 OR2T34Q8NGX1 318 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 OR2T3Q8NH03 318 aa15.5■□□□□ 0.07
SDF4-207ENST00000494748 GPATCH1Q9BRR8 931 aaKnown RBP15.5■□□□□ 0.07
SDF4-207ENST00000494748 KIFC1Q9BW19 673 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms