RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 SLC45A4Q5BKX6 768 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 KCNT1Q5JUK3 1230 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 ERMARDQ5T6L9 678 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 PAPD7Q5XG87 772 aaKnown RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 GLRX5Q86SX6 157 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 IQCHQ86VS3 1027 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 OR2AP1Q8NGE2 309 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 HMCESQ96FZ2 354 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 ALS2CR12Q96Q35 445 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 TM6SF2Q9BZW4 377 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 TRIM7Q9C029 511 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 GPATCH2LQ9NWQ4 482 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 HECAQ9UBI9 543 aaPredicted RBP13.41□□□□□ -0.26
ERCC3-209ENST00000494464 PCOLCE2Q9UKZ9 415 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 TFR2Q9UP52 801 aa13.41□□□□□ -0.26
ERCC3-209ENST00000494464 A0A1B0GTQ1 180 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 SPAARA0A1B0GVQ0 90 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 RASA4BC9J798 803 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 H0Y8X5 98 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 EEF2KO00418 725 aaKnown RBP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 RASA4O43374 803 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 PRPSAP2O60256 369 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 RNGTTO60942 597 aaKnown RBP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 TMCC1O94876 653 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 ADRB3P13945 408 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 MIPP30301 263 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 PCK1P35558 622 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 NDST2P52849 883 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 FAM193AP78312 1265 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 OVGP1Q12889 678 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 SERINC3Q13530 473 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 SUZ12Q15022 739 aaKnown RBP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 CA9Q16790 459 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 INO80DQ53TQ3 878 aaPredicted RBP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 HORMAD1Q86X24 394 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 MFSD2AQ8NA29 543 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 VOPP1Q96AW1 172 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 CAMK1GQ96NX5 476 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 OSBPL1AQ9BXW6 950 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 DHX35Q9H5Z1 703 aaKnown RBP13.4□□□□□ -0.26
ERCC3-209ENST00000494464 ZDHHC6Q9H6R6 413 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 LRRC19Q9H756 370 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 GDF3Q9NR23 364 aa13.4□□□□□ -0.26
ERCC3-209ENST00000494464 A0A1W2PQU0 124 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 MACROD2A1Z1Q3 448 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 EFCAB8A8MWE9 144 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 PRAMEF26H0Y7S4 382 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 WNT9AO14904 365 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 YKT6O15498 198 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 BUB1O43683 1085 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 AP1G1O43747 822 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 TRIM16O95361 564 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 MAT2AP31153 395 aaKnown RBP13.39□□□□□ -0.27
ERCC3-209ENST00000494464 DNA2P51530 1060 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 NXPH1P58417 271 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 FOXC1Q12948 553 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 TRIP6Q15654 476 aaKnown RBP13.39□□□□□ -0.27
ERCC3-209ENST00000494464 INAVAQ3KP66 663 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 KIAA1161Q6NSJ0 714 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 RFX8Q6ZV50 586 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 PARS2Q7L3T8 475 aaKnown RBP13.39□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF354CQ86Y25 554 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 OXR1Q8N573 874 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 CEP112Q8N8E3 955 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 NIPA2Q8N8Q9 360 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 TMEM145Q8NBT3 493 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 ANKRD7Q92527 254 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 RAB7BQ96AH8 199 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 GDAP1L1Q96MZ0 367 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 CNTNAP3BQ96NU0 1288 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 KCTD15Q96SI1 283 aaPredicted RBP13.39□□□□□ -0.27
ERCC3-209ENST00000494464 ELF4Q99607 663 aaPredicted RBP13.39□□□□□ -0.27
ERCC3-209ENST00000494464 CNTNAP3Q9BZ76 1288 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 ERVMER34-1Q9H9K5 563 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 PDFQ9HBH1 243 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 PCSK1NQ9UHG2 260 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 JRKLQ9Y4A0 524 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 PCDHB9Q9Y5E1 797 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 CAPN6Q9Y6Q1 641 aa13.39□□□□□ -0.27
ERCC3-209ENST00000494464 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 A0A0A6YYK5 440 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 TLR4O00206 839 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 POP4O95707 220 aaKnown RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 IGSF6O95976 241 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 GRK6P43250 576 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 HCAR3P49019 387 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 TUBB4BP68371 445 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 PIGHQ14442 188 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 DPYSL2Q16555 572 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF284Q2VY69 593 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 ZNF805Q5CZA5 627 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 ALKBH5Q6P6C2 394 aaKnown RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 RYBPQ8N488 228 aaPredicted RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 OR6K2Q8NGY2 324 aa13.38□□□□□ -0.27
ERCC3-209ENST00000494464 SETD7Q8WTS6 366 aaKnown RBP13.38□□□□□ -0.27
ERCC3-209ENST00000494464 CDC6Q99741 560 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms