RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 PLPP6Q8IY26 295 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 TC2NQ8N9U0 490 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 SETD7Q8WTS6 366 aaKnown RBP14.91□□□□□ -0.02
ATG4B-224ENST00000494132 HDAC8Q9BY41 377 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 CAAP1Q9H8G2 361 aa14.91□□□□□ -0.02
ATG4B-224ENST00000494132 ARID1BQ8NFD5 2236 aaPredicted RBP14.9□□□□□ -0.02
ATG4B-224ENST00000494132 CXorf51AA0A1B0GTR3 108 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 VILLO15195 856 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 SPINT1O43278 529 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 PALMO75781 387 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 MAP3K6O95382 1288 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 TMEM253P0C7T8 217 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 HCAR3P49019 387 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 ZNF75DP51815 510 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 MESDQ14696 234 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 HADHQ16836 314 aaKnown RBP14.9□□□□□ -0.02
ATG4B-224ENST00000494132 ZNF805Q5CZA5 627 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 TMCO3Q6UWJ1 677 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 GDPD4Q6W3E5 623 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 KDM7AQ6ZMT4 941 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 NAXDQ8IW45 347 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 TSEN2Q8NCE0 465 aaKnown RBP14.9□□□□□ -0.02
ATG4B-224ENST00000494132 SLC35G2Q8TBE7 412 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 TEKT4Q8WW24 435 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 CASKIN2Q8WXE0 1202 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 SLC32A1Q9H598 525 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 DONSONQ9NYP3 566 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 UVRAGQ9P2Y5 699 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 IPO11Q9UI26 975 aaKnown RBP14.9□□□□□ -0.02
ATG4B-224ENST00000494132 BTBD3Q9Y2F9 522 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 FADS3Q9Y5Q0 445 aa14.9□□□□□ -0.02
ATG4B-224ENST00000494132 TTC24A2A3L6 582 aaPredicted RBP14.89□□□□□ -0.03
ATG4B-224ENST00000494132 NEMP1O14524 444 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 MUSKO15146 869 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 TOP3BO95985 862 aaKnown RBP14.89□□□□□ -0.03
ATG4B-224ENST00000494132 CEACAM1P13688 526 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF135P52742 658 aaPredicted RBP14.89□□□□□ -0.03
ATG4B-224ENST00000494132 CLDN2P57739 230 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 SIM1P81133 766 aaPredicted RBP14.89□□□□□ -0.03
ATG4B-224ENST00000494132 SEMG2Q02383 582 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 RAD51Q06609 339 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 CCDC15Q0P6D6 951 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 FOXC1Q12948 553 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 FGL2Q14314 439 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 STAT4Q14765 748 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF284Q2VY69 593 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 ZFYVE27Q5T4F4 411 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 GATAD2AQ86YP4 633 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 TSC1Q92574 1164 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 LRIG1Q96JA1 1093 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 CINPQ9BW66 212 aaPredicted RBP14.89□□□□□ -0.03
ATG4B-224ENST00000494132 CALN1Q9BXU9 219 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 TFR2Q9UP52 801 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 HYOU1Q9Y4L1 999 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 PTPRBP23467 1997 aa14.89□□□□□ -0.03
ATG4B-224ENST00000494132 MFSD11O43934 449 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 PRKCGP05129 697 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 TNNT1P13805 278 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 SPINK2P20155 84 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 IL4RP24394 825 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 CCT8P50990 548 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 ARSEP51690 589 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 IL10RBQ08334 325 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 SLC10A7Q0GE19 358 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 SLC14A1Q13336 389 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 DPYSL3Q14195 570 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 ZNF423Q2M1K9 1284 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 TMEM259Q4ZIN3 620 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 SLC45A4Q5BKX6 768 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 TTC7BQ86TV6 843 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 SPATS2Q86XZ4 545 aaKnown RBP14.88□□□□□ -0.03
ATG4B-224ENST00000494132 LRRN4Q8WUT4 740 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 NSMCE3Q96MG7 304 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 OSBPL1AQ9BXW6 950 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 DMTF1Q9Y222 760 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 PCDHB9Q9Y5E1 797 aa14.88□□□□□ -0.03
ATG4B-224ENST00000494132 IGLON5A6NGN9 336 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 UPK3BL1B0FP48 263 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 UPK3BL2E5RIL1 263 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 PRAMEF26H0Y7S4 382 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 TLR4O00206 839 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 RAD51BO15315 384 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 BUB1BO60566 1050 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 PAK4O96013 591 aaPredicted RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 TIMP2P16035 220 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 NXPH1P58417 271 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 LBRQ14739 615 aaKnown RBP14.87□□□□□ -0.03
ATG4B-224ENST00000494132 SHBQ15464 509 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 NEK5Q6P3R8 708 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 GCNT7Q6ZNI0 430 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 SRLQ86TD4 932 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 ZSWIM9Q86XI8 627 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 CAMK1DQ8IU85 385 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 ATPAF2Q8N5M1 289 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 LZTR1Q8N653 840 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 MFSD2AQ8NA29 543 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 TMEM145Q8NBT3 493 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 KCTD6Q8NC69 237 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 PCDH19Q8TAB3 1148 aa14.87□□□□□ -0.03
ATG4B-224ENST00000494132 SKA1Q96BD8 255 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms