RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 NLRP9Q7RTR0 991 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 DENND6AQ8IWF6 608 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 PLD6Q8N2A8 252 aaKnown RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TMEM199Q8N511 208 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 GBP7Q8N8V2 638 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 ADAMTS19Q8TE59 1207 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 ATP2A3Q93084 1043 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 E2F7Q96AV8 911 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 ERP27Q96DN0 273 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 SEMA3CQ99985 751 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 RNF38Q9H0F5 515 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 IL23AQ9NPF7 189 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 GKN1Q9NS71 199 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 TMEM216Q9P0N5 145 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 UBA2Q9UBT2 640 aaPredicted RBP10.77□□□□□ -0.69
CLCN6-208ENST00000494028 STOML2Q9UJZ1 356 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 MAFFQ9ULX9 164 aa10.77□□□□□ -0.69
CLCN6-208ENST00000494028 NUP210Q8TEM1 1887 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 A0A096LPK6 155 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 LOC285095A0A1B0GVY8 99 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ILVBLA1L0T0 632 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 GREM1O60565 184 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 DCTN3O75935 186 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 FGF18O76093 207 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 VAPBO95292 243 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 PAPSS2O95340 614 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 MPOP05164 745 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 FGF1P05230 155 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 MBL2P11226 248 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 NEFHP12036 1026 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 HLA-DPA1P20036 260 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 NUMBP49757 651 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 EPHB3P54753 998 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 IRX4P78413 519 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 CYP4F8P98187 520 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ITKQ08881 620 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 BNIP1Q12981 228 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 CNGA3Q16281 694 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 TAF12Q16514 161 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 UGP2Q16851 508 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 FASTKD1Q53R41 847 aaKnown RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ATG16L1Q676U5 607 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF470Q6ECI4 717 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ZCCHC23Q6ZST2 131 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 KDELC2Q7Z4H8 507 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 DNAJB7Q7Z6W7 309 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 NUDCD3Q8IVD9 361 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 SLC41A1Q8IVJ1 513 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 MFSD6LQ8IWD5 586 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 FAM217AQ8IXS0 508 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 C2CD4AQ8NCU7 369 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 OR13J1Q8NGT2 312 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 SKA1Q96BD8 255 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ABHD8Q96I13 439 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 NSMCE3Q96MG7 304 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 TRIB3Q96RU7 358 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 SLC22A12Q96S37 553 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 CINPQ9BW66 212 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 TMEM120AQ9BXJ8 343 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 ACE2Q9BYF1 805 aaPredicted RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 TRIM55Q9BYV6 548 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 RASSF4Q9H2L5 321 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 TRPC7Q9HCX4 862 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 MRPL17Q9NRX2 175 aaKnown RBP10.76□□□□□ -0.69
CLCN6-208ENST00000494028 SMPD4Q9NXE4 827 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 SEPT3Q9UH03 358 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 NUMBLQ9Y6R0 609 aa10.76□□□□□ -0.69
CLCN6-208ENST00000494028 FAM95CA0A1B0GW59 222 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 MROH6A6NGR9 719 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 NRG2O14511 850 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 HGSO14964 777 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 AURKAO14965 403 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 PHGDHO43175 533 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 KDELR3O43731 214 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 TSPAN3O60637 253 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SERPINE1P05121 402 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 C2P06681 752 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 DLDP09622 509 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 EN2P19622 333 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CR2P20023 1033 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ELF1P32519 619 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 HADHAP40939 763 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SKIV2L2P42285 1042 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CD151P48509 253 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SMAD3P84022 425 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ARF5P84085 180 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ACVR1Q04771 509 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 GALNT3Q14435 633 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CCDC153Q494R4 210 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 TAF1BQ53T94 588 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SPDYAQ5MJ70 313 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ADGRF1Q5T601 910 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 IL31Q6EBC2 164 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 KIAA0408Q6ZU52 694 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 OTOP2Q7RTS6 562 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 NECAB2Q7Z6G3 386 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SETD3Q86TU7 594 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ITIH5Q86UX2 942 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms