RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 BASP1P80723 227 aaKnown RBP15.1■□□□□ 0.01
ACTB-213ENST00000493945 CRY1Q16526 586 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 EMC10Q5UCC4 262 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 NAPEPLDQ6IQ20 393 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 BRAT1Q6PJG6 821 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 DPY19L3Q6ZPD9 716 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 BMP8AQ7Z5Y6 402 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 LINC00523Q86TU6 105 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 CAMKK1Q8N5S9 505 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 OR2A12Q8NGT7 310 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 CCDC110Q8TBZ0 833 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 HCAR2Q8TDS4 363 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 PRCCQ92733 491 aaPredicted RBP15.1■□□□□ 0.01
ACTB-213ENST00000493945 EZH1Q92800 747 aaPredicted RBP15.1■□□□□ 0.01
ACTB-213ENST00000493945 PTPRN2Q92932 1015 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 EXOC2Q96KP1 924 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 SRPK1Q96SB4 655 aaKnown RBP15.1■□□□□ 0.01
ACTB-213ENST00000493945 LRRC40Q9H9A6 602 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 USP29Q9HBJ7 922 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 PRSS16Q9NQE7 514 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 NCKAP1Q9Y2A7 1128 aa15.1■□□□□ 0.01
ACTB-213ENST00000493945 TCRBV21S2A2A0A5A6 115 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 SHISA7A6NL88 538 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 APBB3O95704 486 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 IL1BP01584 269 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 C5AR1P21730 350 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 CD86P42081 329 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 CXCL12P48061 93 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 EPHB1P54762 984 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 RPL26P61254 145 aaKnown RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 CALCOCO2Q13137 446 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 PTK6Q13882 451 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 ATXN7L2Q5T6C5 722 aaPredicted RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 C9orf64Q5T6V5 341 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 ARMC12Q5T9G4 340 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 CWF19L1Q69YN2 538 aaKnown RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 GDPD4Q6W3E5 623 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 PPP1R21Q6ZMI0 780 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 MAMSTRQ6ZN01 415 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 Q6ZS52 159 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 KBTBD6Q86V97 674 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 JAMLQ86YT9 394 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 SFTPA1Q8IWL2 248 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 ZNF687Q8N1G0 1237 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 PGBD3Q8N328 593 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 FBXL6Q8N531 539 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 GRIN3AQ8TCU5 1115 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 IMP4Q96G21 291 aaKnown RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 ACOX2Q99424 681 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 CARD6Q9BX69 1037 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 CEP41Q9BYV8 373 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 RSPH9Q9H1X1 276 aaPredicted RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 RAB6BQ9NRW1 208 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 SPATA6Q9NWH7 488 aaPredicted RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 EVLQ9UI08 416 aaPredicted RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 RPL26L1Q9UNX3 145 aaKnown RBP15.09■□□□□ 0.01
ACTB-213ENST00000493945 TECTAO75443 2155 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 UNC80Q8N2C7 3258 aa15.09■□□□□ 0.01
ACTB-213ENST00000493945 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.08■□□□□ 0
ACTB-213ENST00000493945 KPNA3O00505 521 aaPredicted RBP15.08■□□□□ 0
ACTB-213ENST00000493945 LAMTOR5O43504 91 aa15.08■□□□□ 0
ACTB-213ENST00000493945 CR2P20023 1033 aa15.08■□□□□ 0
ACTB-213ENST00000493945 ITGB7P26010 798 aa15.08■□□□□ 0
ACTB-213ENST00000493945 PSMB4P28070 264 aa15.08■□□□□ 0
ACTB-213ENST00000493945 ADCY8P40145 1251 aa15.08■□□□□ 0
ACTB-213ENST00000493945 PSMD8P48556 350 aa15.08■□□□□ 0
ACTB-213ENST00000493945 GDF10P55107 478 aa15.08■□□□□ 0
ACTB-213ENST00000493945 CDK16Q00536 496 aa15.08■□□□□ 0
ACTB-213ENST00000493945 DSC2Q02487 901 aa15.08■□□□□ 0
ACTB-213ENST00000493945 GPS1Q13098 491 aa15.08■□□□□ 0
ACTB-213ENST00000493945 TTC27Q6P3X3 843 aa15.08■□□□□ 0
ACTB-213ENST00000493945 NCEH1Q6PIU2 408 aa15.08■□□□□ 0
ACTB-213ENST00000493945 B4GALNT4Q76KP1 1039 aa15.08■□□□□ 0
ACTB-213ENST00000493945 STK40Q8N2I9 435 aa15.08■□□□□ 0
ACTB-213ENST00000493945 MMGT1Q8N4V1 131 aa15.08■□□□□ 0
ACTB-213ENST00000493945 ZNF366Q8N895 744 aa15.08■□□□□ 0
ACTB-213ENST00000493945 PIP4K2CQ8TBX8 421 aa15.08■□□□□ 0
ACTB-213ENST00000493945 GANCQ8TET4 914 aa15.08■□□□□ 0
ACTB-213ENST00000493945 LRRN4Q8WUT4 740 aa15.08■□□□□ 0
ACTB-213ENST00000493945 SIPA1Q96FS4 1042 aa15.08■□□□□ 0
ACTB-213ENST00000493945 C10orf88Q9H8K7 445 aa15.08■□□□□ 0
ACTB-213ENST00000493945 EIF2B3Q9NR50 452 aaKnown RBP15.08■□□□□ 0
ACTB-213ENST00000493945 MTF2Q9Y483 593 aaPredicted RBP15.08■□□□□ 0
ACTB-213ENST00000493945 ACTL7AQ9Y615 435 aa15.08■□□□□ 0
ACTB-213ENST00000493945 TTC28Q96AY4 2481 aa15.08■□□□□ 0
ACTB-213ENST00000493945 EFCAB8A8MWE9 144 aa15.07■□□□□ 0
ACTB-213ENST00000493945 ADAM23O75077 832 aa15.07■□□□□ 0
ACTB-213ENST00000493945 ZNF217O75362 1048 aa15.07■□□□□ 0
ACTB-213ENST00000493945 LEFTY1O75610 366 aa15.07■□□□□ 0
ACTB-213ENST00000493945 PAPSS2O95340 614 aaPredicted RBP15.07■□□□□ 0
ACTB-213ENST00000493945 SLU7O95391 586 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 CPP00450 1065 aa15.07■□□□□ 0
ACTB-213ENST00000493945 EPOP01588 193 aa15.07■□□□□ 0
ACTB-213ENST00000493945 UGT2B4P06133 528 aa15.07■□□□□ 0
ACTB-213ENST00000493945 DCNP07585 359 aaKnown RBP15.07■□□□□ 0
ACTB-213ENST00000493945 HLA-DPA1P20036 260 aa15.07■□□□□ 0
ACTB-213ENST00000493945 NUBP1P53384 320 aa15.07■□□□□ 0
ACTB-213ENST00000493945 SATB1Q01826 763 aa15.07■□□□□ 0
ACTB-213ENST00000493945 CST6Q15828 149 aa15.07■□□□□ 0
ACTB-213ENST00000493945 ZNF805Q5CZA5 627 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms