RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 FAM90A13PP0C7W8 464 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 FAM90A24PP0C7X0 464 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ACO1P21399 889 aaKnown RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CD72P21854 359 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CYP2C18P33260 490 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 TCF7P36402 384 aaPredicted RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 PTPN9P43378 593 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CAMPP49913 170 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 MRPS5P82675 430 aaKnown RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 PPP2R5CQ13362 524 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ALCAMQ13740 583 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 TOB2Q14106 344 aaPredicted RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 SHBQ15464 509 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ZSCAN23Q3MJ62 389 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ANKRD16Q6P6B7 361 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 SLC2A7Q6PXP3 512 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 GLRX5Q86SX6 157 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 C16orf71Q8IYS4 520 aaPredicted RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 HACE1Q8IYU2 909 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CNPY4Q8N129 248 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CCAR2Q8N163 923 aaKnown RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 NUP93Q8N1F7 819 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 CARNMT1Q8N4J0 409 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 TMEM170AQ8WVE7 144 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 EDAQ92838 391 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ARHGEF26Q96DR7 871 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 MYEOVQ96EZ4 313 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 FBXL20Q96IG2 436 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 DGAT2Q96PD7 388 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 TEFMQ96QE5 360 aaKnown RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 FRG2BQ96QU4 278 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 BDH2Q9BUT1 245 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ZNF768Q9H5H4 540 aaKnown RBP4.63□□□□□ -1.67
GTF3A-208ENST00000493903 OPA3Q9H6K4 179 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 Q9N2J8 555 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 SLC6A13Q9NSD5 602 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ARL15Q9NXU5 204 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 KCTD5Q9NXV2 234 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 DLL3Q9NYJ7 618 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 GRHL1Q9NZI5 618 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 WDR35Q9P2L0 1181 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 AMACRQ9UHK6 382 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 OSGIN1Q9UJX0 560 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 PADI1Q9ULC6 663 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 KNSTRNQ9Y448 316 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 RIMBP3CA6NJZ7 1639 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 RIMBP3BA6NNM3 1639 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 RIMBP3Q9UFD9 1639 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 ZNF536O15090 1300 aa4.63□□□□□ -1.67
GTF3A-208ENST00000493903 TRBC2A0A5B9 178 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 MITFO75030 526 aaPredicted RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 SPDEFO95238 335 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TFP02787 698 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 FCGR2AP12318 317 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 KRT10P13645 584 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 APEHP13798 732 aaKnown RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PTPN2P17706 415 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 CPT2P23786 658 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PTAFRP25105 342 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PSMA3P25788 255 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PON1P27169 355 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PCSK6P29122 969 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 CIITAP33076 1130 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 FOLR3P41439 243 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 F2RL1P55085 397 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TFAP4Q01664 338 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TAP1Q03518 808 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 DDR1Q08345 913 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 IKQ13123 557 aaPredicted RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 FGFBP1Q14512 234 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 VEPH1Q14D04 833 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PLK5Q496M5 336 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 SOWAHCQ53LP3 525 aaPredicted RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 HS1BP3Q53T59 392 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 KRBOX4Q5JUW0 171 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 SPDYAQ5MJ70 313 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 CST9LP1Q5W188 147 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 KIAA0895LQ68EN5 471 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 CPLX2Q6PUV4 134 aaKnown RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 RAPH1Q70E73 1250 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 GPAT4Q86UL3 456 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 KLBQ86Z14 1044 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TMCO5AQ8N6Q1 288 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 OR6J1Q8NGC5 347 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 LRRC59Q96AG4 307 aaKnown RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 SIPA1Q96FS4 1042 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TMEM68Q96MH6 324 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 HS6ST2Q96MM7 605 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 OR2A14Q96R47 310 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 FNBP1Q96RU3 617 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 DNAI2Q9GZS0 605 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 KLC2Q9H0B6 622 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PLEKHA4Q9H4M7 779 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 SERTAD4Q9NUC0 356 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 ASNSD1Q9NWL6 643 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 ARHGEF38Q9NXL2 777 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 PLK2Q9NYY3 685 aa4.62□□□□□ -1.67
GTF3A-208ENST00000493903 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.62□□□□□ -1.67
GTF3A-208ENST00000493903 TUBE1Q9UJT0 475 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms