RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 CACUL1Q86Y37 369 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 PPIL6Q8IXY8 311 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 RPLP0P6Q8NHW5 317 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 PDCD6IPQ8WUM4 868 aaKnown RBP19.61■□□□□ 0.73
USP39-218ENST00000493829 PTPRN2Q92932 1015 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 FICDQ9BVA6 458 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 FAM153AQ9UHL3 310 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 ANAPC5Q9UJX4 755 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 PCDHGC4Q9Y5F7 938 aa19.61■□□□□ 0.73
USP39-218ENST00000493829 F5P12259 2224 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 ATG2BQ96BY7 2078 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 EDDM13A0A1B0GTR0 161 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 STK25O00506 426 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 ANXA9O76027 345 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 SERPINF2P08697 491 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 CHRM1P11229 460 aaPredicted RBP19.6■□□□□ 0.73
USP39-218ENST00000493829 HNRNPLP14866 589 aaKnown RBP eCLIP19.6■□□□□ 0.73
USP39-218ENST00000493829 CARSP49589 748 aaKnown RBP19.6■□□□□ 0.73
USP39-218ENST00000493829 GEMP55040 296 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 PLTPP55058 493 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 NCEH1Q6PIU2 408 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 IFT20Q8IY31 132 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 STK40Q8N2I9 435 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 PAF1Q8N7H5 531 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 IL17RCQ8NAC3 791 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 TXNDC5Q8NBS9 432 aaKnown RBP19.6■□□□□ 0.73
USP39-218ENST00000493829 MYRIPQ8NFW9 859 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 PWWP2AQ96N64 755 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 FSD1LQ9BXM9 530 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 WHRNQ9P202 907 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 FARP1Q9Y4F1 1045 aaPredicted RBP19.6■□□□□ 0.73
USP39-218ENST00000493829 ANKRD36A6QL64 1941 aa19.6■□□□□ 0.73
USP39-218ENST00000493829 TARSL2A2RTX5 802 aaKnown RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 WNT3AP56704 352 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 AP1S1P61966 158 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 TUBB4BP68371 445 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 NSUN2Q08J23 767 aaKnown RBP eCLIP19.59■□□□□ 0.73
USP39-218ENST00000493829 TRAF2Q12933 501 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 MYLK3Q32MK0 819 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 POM121L1PQ3SYA9 428 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 KDELC1Q6UW63 502 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 CAMK1DQ8IU85 385 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 PRCCQ92733 491 aaPredicted RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 SHDQ96IW2 340 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 UHRF1Q96T88 793 aaPredicted RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 NEUROG2Q9H2A3 272 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 TBC1D17Q9HA65 648 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 LTB4R2Q9NPC1 389 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GDF3Q9NR23 364 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 FAM114A2Q9NRY5 505 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 POLR3BQ9NW08 1133 aaPredicted RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 AAR2Q9Y312 384 aaKnown RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 VCANP13611 3396 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GOLGA6CA6NDK9 693 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GOLGA6BA6NDN3 693 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 AP2A1O95782 977 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GOLGA6DP0CG33 693 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GRIA1P42261 906 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 VASPP50552 380 aaPredicted RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 MPP3Q13368 585 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GALNT3Q14435 633 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 C9orf64Q5T6V5 341 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 HIBCHQ6NVY1 386 aaPredicted RBP19.59■□□□□ 0.73
USP39-218ENST00000493829 PKN3Q6P5Z2 889 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 ZDHHC24Q6UX98 284 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 NAT8LQ8N9F0 302 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 KDM1BQ8NB78 822 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 SEC14L1Q92503 715 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 MRGPRX2Q96LB1 330 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 GOLGA6AQ9NYA3 693 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 RAI2Q9Y5P3 530 aa19.59■□□□□ 0.73
USP39-218ENST00000493829 KANSL1LA0AUZ9 987 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 BHMG1C9JSJ3 638 aaPredicted RBP19.58■□□□□ 0.72
USP39-218ENST00000493829 TP73O15350 636 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 ADAM23O75077 832 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 AGTP01019 485 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 UGT2B4P06133 528 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 CTSLP07711 333 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 HOXB2P14652 356 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 ITIH2P19823 946 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 NTSR1P30989 418 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 CHRNA4P43681 627 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 STARD6P59095 220 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 VSNL1P62760 191 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 ZXDAP98168 799 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 BCL2L1Q07817 233 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 FBXO43Q4G163 708 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 KCTD11Q693B1 232 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 SDE2Q6IQ49 451 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 PPP1R21Q6ZMI0 780 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 PCGF5Q86SE9 256 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 SLC25A41Q8N5S1 370 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 BBOF1Q8ND07 529 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 FBXO25Q8TCJ0 367 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 IFT43Q96FT9 208 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 TBL1YQ9BQ87 522 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 TDRD1Q9BXT4 1180 aaKnown RBP19.58■□□□□ 0.72
USP39-218ENST00000493829 ATP13A3Q9H7F0 1226 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 LRRC40Q9H9A6 602 aa19.58■□□□□ 0.72
USP39-218ENST00000493829 PRSS16Q9NQE7 514 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms