RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 USP17L7P0C7H9 530 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 DPYSQ14117 519 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 ZNHIT3Q15649 155 aaPredicted RBP20.3■□□□□ 0.84
RNF40-203ENST00000493683 MIIPQ5JXC2 388 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 PPP1R15BQ5SWA1 713 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 SLC41A1Q8IVJ1 513 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 PIH1D1Q9NWS0 290 aaKnown RBP20.3■□□□□ 0.84
RNF40-203ENST00000493683 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.3■□□□□ 0.84
RNF40-203ENST00000493683 AK5Q9Y6K8 562 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 SLC26A3P40879 764 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 COMMD2Q86X83 199 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 CYP2W1Q8TAV3 490 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 SOCS4Q8WXH5 440 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 SHC3Q92529 594 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 TINF2Q9BSI4 451 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 NCKAP1Q9Y2A7 1128 aa20.3■□□□□ 0.84
RNF40-203ENST00000493683 OPLAHO14841 1288 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 TSPAN3O60637 253 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 IDH2P48735 452 aaKnown RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 ZNF846Q147U1 533 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 IQSEC1Q6DN90 963 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 R3HCC1LQ7Z5L2 792 aaKnown RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 PRELID2Q8N945 189 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 MCCC1Q96RQ3 725 aaPredicted RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 MLPHQ9BV36 600 aaPredicted RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 ATXN3LQ9H3M9 355 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 CLK4Q9HAZ1 481 aaKnown RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 EML1O00423 815 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 ALOX15BO15296 676 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 KLHL18O94889 574 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 TGDSO95455 350 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 ZSCAN5DPP0CG00 497 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 DGCR6Q14129 220 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 QPRTQ15274 297 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 BPIFB6Q8NFQ5 453 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 SKA1Q96BD8 255 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 TRIT1Q9H3H1 467 aaKnown RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 NUDT5Q9UKK9 219 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 TEX28O15482 410 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 PSEN2P49810 448 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 NR1D2Q14995 579 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 FOXR1Q6PIV2 292 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 DENND6AQ8IWF6 608 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 SENP8Q96LD8 212 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 ACE2Q9BYF1 805 aaPredicted RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 hCG_1818297A0A087WSY0 165 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 ATP5C1P36542 298 aaKnown RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 BIKQ13323 160 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 LIN54Q6MZP7 749 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 GPRIN3Q6ZVF9 776 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 LNX1Q8TBB1 728 aaPredicted RBP20.29■□□□□ 0.84
RNF40-203ENST00000493683 PTPRHQ9HD43 1115 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 MCM8Q9UJA3 840 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 VPS4AQ9UN37 437 aa20.29■□□□□ 0.84
RNF40-203ENST00000493683 TNFRSF21O75509 655 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 SNRPD1P62314 119 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 TMEM63BQ5T3F8 832 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ARMC8Q8IUR7 673 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.28■□□□□ 0.849e-6■■□□□ 11.8
RNF40-203ENST00000493683 LOC100506127A0A0U1RQW1 187 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 TAF4O00268 1085 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 PDE2AO00408 941 aaPredicted RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 SLC9A3R1O14745 358 aaPredicted RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 POLR2EP19388 210 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 FSCN1Q16658 493 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 SLC39A12Q504Y0 691 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 VPS35Q96QK1 796 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 COMMD9Q9P000 198 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ITGA2BP08514 1039 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 CCT3P49368 545 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 KCTD21Q4G0X4 260 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 HYIQ5T013 277 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 CLYBLQ8N0X4 340 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ADAM32Q8TC27 787 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 KAT5Q92993 513 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 MKL1Q969V6 931 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ZHX1-C8orf76Q96EF9 292 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 RTKNQ9BST9 563 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 SNRNP25Q9BV90 132 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 WDR12Q9GZL7 423 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 VPS45Q9NRW7 570 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 CMTM6Q9NX76 183 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 MAGEL2Q9UJ55 1249 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 SCAF8Q9UPN6 1271 aaKnown RBP20.28■□□□□ 0.84
RNF40-203ENST00000493683 FAM50BQ9Y247 325 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 TFEBP19484 476 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ANXA8L1Q5VT79 327 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 ZNF540Q8NDQ6 660 aa20.28■□□□□ 0.84
RNF40-203ENST00000493683 QKIQ96PU8 341 aaKnown RBP eCLIP20.28■□□□□ 0.84
RNF40-203ENST00000493683 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.27■□□□□ 0.84
RNF40-203ENST00000493683 PSMD10O75832 226 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 CABYRO75952 493 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 FTH1P02794 183 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 CCNB1P14635 433 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 RTP1P59025 263 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 IRAK1BP1Q5VVH5 260 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 FAM183BPQ6ZVS7 135 aa20.27■□□□□ 0.84
RNF40-203ENST00000493683 REXO5Q96IC2 774 aaKnown RBP20.27■□□□□ 0.84
RNF40-203ENST00000493683 HOPXQ9BPY8 73 aaPredicted RBP20.27■□□□□ 0.84
RNF40-203ENST00000493683 POLR1BQ9H9Y6 1135 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms