RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 PDFQ9HBH1 243 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 DNAAF2Q9NVR5 837 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 IPO11Q9UI26 975 aaKnown RBP7.08□□□□□ -1.28
TOP3A-207ENST00000493648 ANKRD6Q9Y2G4 727 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 DMDP11532 3685 aa7.08□□□□□ -1.28
TOP3A-207ENST00000493648 WDR87Q6ZQQ6 2873 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 FRYLO94915 3013 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 A0A1W2PQU0 124 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 GOLGA6L6A8MZA4 724 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 C10orf142B7Z368 130 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TLR4O00206 839 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 RNF103O00237 685 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 NEMP1O14524 444 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SLC31A1O15431 190 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TSPAN6O43657 245 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 AP1G1O43747 822 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 KCNK5O95279 499 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 LCA5LO95447 670 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ZNF883P0CG24 379 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CEACAM1P13688 526 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 XPAP23025 273 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 IL4RP24394 825 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 HSPA9P38646 679 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CSNK1DP48730 415 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SUOXP51687 545 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ARSEP51690 589 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TAS2R40P59535 323 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PPP2CBP62714 309 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 POLR2LP62875 67 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 RPS21P63220 83 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PPP2CAP67775 309 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 MMRN1Q13201 1228 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SGCGQ13326 291 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 HNRNPDQ14103 355 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 DPYSL3Q14195 570 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 LBRQ14739 615 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ANKRD20A8PQ5CZ79 823 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CFAP58Q5T655 872 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 LRRC38Q5VT99 294 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 NAPEPLDQ6IQ20 393 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 KIAA1161Q6NSJ0 714 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PARS2Q7L3T8 475 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SRLQ86TD4 932 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 IQCHQ86VS3 1027 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 RHOT1Q8IXI2 618 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 NPWQ8N729 165 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PAF1Q8N7H5 531 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 MFSD2AQ8NA29 543 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 NETO2Q8NC67 525 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 OR2I1PQ8NGU4 316 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TSC1Q92574 1164 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 KLHDC7BQ96G42 594 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CALR3Q96L12 384 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ZNF641Q96N77 438 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SLC6A18Q96N87 628 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TUBGCP5Q96RT8 1024 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CINPQ9BW66 212 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 MAK16Q9BXY0 300 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SLC17A9Q9BYT1 436 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SUV39H2Q9H5I1 410 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 TM7SF3Q9NS93 570 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 HAUS2Q9NVX0 235 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 DDX56Q9NY93 547 aaKnown RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 IMPACTQ9P2X3 320 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 DKK3Q9UBP4 350 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 LHX3Q9UBR4 397 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SEPT3Q9UH03 358 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PCDHB9Q9Y5E1 797 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PCDHA13Q9Y5I0 950 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 FADS3Q9Y5Q0 445 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SNX11Q9Y5W9 270 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 EPN1Q9Y6I3 576 aaPredicted RBP7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SLCO1B1Q9Y6L6 691 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 PCDH15Q96QU1 1955 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 CFAP54Q96N23 3096 aa7.07□□□□□ -1.28
TOP3A-207ENST00000493648 SPTBN4Q9H254 2564 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 DOCK9Q9BZ29 2069 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.06□□□□□ -1.28
TOP3A-207ENST00000493648 KCNK3O14649 394 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 WNT9AO14904 365 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 INSIG1O15503 277 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 SPOPO43791 374 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 MAFKO60675 156 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 GJB3O75712 270 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 NDUFA10O95299 355 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 PAK4O96013 591 aaPredicted RBP7.06□□□□□ -1.28
TOP3A-207ENST00000493648 CD48P09326 243 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 CD59P13987 128 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 TIMP2P16035 220 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 ZFXP17010 805 aaPredicted RBP7.06□□□□□ -1.28
TOP3A-207ENST00000493648 HNRNPA2B1P22626 353 aaKnown RBP7.06□□□□□ -1.28
TOP3A-207ENST00000493648 KDELR1P24390 212 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 SERPINA4P29622 427 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 CDC25BP30305 580 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 AKT2P31751 481 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 CTSKP43235 329 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 SCNN1BP51168 640 aa7.06□□□□□ -1.28
TOP3A-207ENST00000493648 NOVA1P51513 510 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms