RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ZCCHC14Q8WYQ9 949 aaKnown RBP11.77□□□□□ -0.53
CTSA-209ENST00000493522 ALG3Q92685 438 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 GATA6Q92908 595 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 EXOC2Q96KP1 924 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 GDAP1L1Q96MZ0 367 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 ZDHHC6Q9H6R6 413 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 LHX3Q9UBR4 397 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 NEUROG3Q9Y4Z2 214 aa11.77□□□□□ -0.53
CTSA-209ENST00000493522 MCF2LO15068 1137 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 MID1O15344 667 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 CST8O60676 142 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ZNF217O75362 1048 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 TOP3BO95985 862 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 ADH1BP00325 375 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 CFIP05156 583 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 MX2P20592 715 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 TGM2P21980 687 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 CHRNA3P32297 505 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 GARSP41250 739 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 COPS2P61201 443 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ZBTB16Q05516 673 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ZNF211Q13398 564 aaPredicted RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 LBRQ14739 615 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 TAZQ16635 292 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 MAP7D1Q3KQU3 841 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 POM121L1PQ3SYA9 428 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 INO80DQ53TQ3 878 aaPredicted RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 CCDC181Q5TID7 509 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 PEAR1Q5VY43 1037 aaPredicted RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 NPNTQ6UXI9 565 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 SLC36A4Q6YBV0 504 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 DPY19L3Q6ZPD9 716 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 TRIM58Q8NG06 486 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 OR2AP1Q8NGE2 309 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 OR2A12Q8NGT7 310 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 PIP4K2CQ8TBX8 421 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ISG20Q96AZ6 181 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 HAUS1Q96CS2 278 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ZNF599Q96NL3 588 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 FAM129BQ96TA1 746 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 HEMGNQ9BXL5 484 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 PABPC3Q9H361 631 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 TMEM74BQ9NUR3 256 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 TRMT1Q9NXH9 659 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 DTLQ9NZJ0 730 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 HECAQ9UBI9 543 aaPredicted RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 IL36AQ9UHA7 158 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 MBD1Q9UIS9 605 aaPredicted RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 PILRBQ9UKJ0 227 aa11.76□□□□□ -0.53
CTSA-209ENST00000493522 ATXN2Q99700 1313 aaKnown RBP11.76□□□□□ -0.53
CTSA-209ENST00000493522 SMG1Q96Q15 3661 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 ASCC3Q8N3C0 2202 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 IGHV1OR15-9A0A0B4J2B8 117 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SRRM3A6NNA2 597 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 UPK3BL1B0FP48 263 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 UPK3BL2E5RIL1 263 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 KPNA3O00505 521 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 KRIT1O00522 736 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PPP1R12AO14974 1030 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 DDX3YO15523 660 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 HYAL3O43820 417 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 MAFKO60675 156 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 ZNF821O75541 412 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 RNASEH2AO75792 299 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 NEBLO76041 1014 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 TRIM16O95361 564 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PRNPP04156 253 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 CTSLP07711 333 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PECAM1P16284 738 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 C5AR1P21730 350 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 ITPKAP23677 461 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SLC8A1P32418 973 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PEX5P50542 639 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 TPMTP51580 245 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SIM1P81133 766 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 RPL6Q02878 288 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 SLC10A7Q0GE19 358 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SFSWAPQ12872 951 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 SLC10A2Q12908 348 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 RFTN1Q14699 578 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 CYTH1Q15438 398 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 DUOXA1Q1HG43 343 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SEL1L2Q5TEA6 688 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 TIGD7Q6NT04 549 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 AADACL2Q6P093 401 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 BBS5Q8N3I7 341 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 FRMD1Q8N878 549 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 CCNYQ8ND76 341 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 HDAC11Q96DB2 347 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 HES6Q96HZ4 224 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 OMDQ99983 421 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 HEPHQ9BQS7 1158 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 GTPBP2Q9BX10 602 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 OSBPL8Q9BZF1 889 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 DYRK4Q9NR20 520 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 FBXL12Q9NXK8 326 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 USP36Q9P275 1121 aaKnown RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 SEPT3Q9UH03 358 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms