RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 RASA4BC9J798 803 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 ATMINO43313 823 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-204ENST00000492601 RASA4O43374 803 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 TSPAN6O43657 245 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 PIAS2O75928 621 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 CDK4P11802 303 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 DAB2P98082 770 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 TARDBPQ13148 414 aaKnown RBP eCLIP17.51■□□□□ 0.398e-7■■■■■ 29.1
SGMS1-204ENST00000492601 ZNF211Q13398 564 aaPredicted RBP17.51■□□□□ 0.39
SGMS1-204ENST00000492601 KYAT3Q6YP21 454 aaKnown RBP17.51■□□□□ 0.39
SGMS1-204ENST00000492601 KDM7AQ6ZMT4 941 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 TMC6Q7Z403 805 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 DNAAF5Q86Y56 855 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 LRIG1Q96JA1 1093 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 GDAP1L1Q96MZ0 367 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
SGMS1-204ENST00000492601 DKK4Q9UBT3 224 aa17.51■□□□□ 0.39
SGMS1-204ENST00000492601 LRRC53A6NM62 1247 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 SPINT1O43278 529 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 IGSF6O95976 241 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 RHOAP61586 193 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 HS1BP3Q53T59 392 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 GDPD4Q6W3E5 623 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 TTC7BQ86TV6 843 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 OR4C6Q8NH72 309 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 HNRNPLLQ8WVV9 542 aaKnown RBP17.5■□□□□ 0.39
SGMS1-204ENST00000492601 RAB7BQ96AH8 199 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 KLF6Q99612 283 aaPredicted RBP17.5■□□□□ 0.39
SGMS1-204ENST00000492601 SYT11Q9BT88 431 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 C1QTNF2Q9BXJ5 285 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 OSBPL1AQ9BXW6 950 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 TTYH3Q9C0H2 523 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 CATSPERBQ9H7T0 1116 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 IPO11Q9UI26 975 aaKnown RBP17.5■□□□□ 0.39
SGMS1-204ENST00000492601 KIF26BQ2KJY2 2108 aa17.5■□□□□ 0.39
SGMS1-204ENST00000492601 FPGTO14772 594 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 INSIG1O15503 277 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 NEBLO76041 1014 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 MYF5P13349 255 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 DESP17661 470 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 ITIH2P19823 946 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 ACP1P24666 158 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 PSMA2P25787 234 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 AIF1P55008 147 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 YBEYP58557 167 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-204ENST00000492601 TPI1P60174 286 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 RAD51Q06609 339 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 ILKQ13418 452 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 MAMLD1Q13495 774 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 SERINC3Q13530 473 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 PDE1CQ14123 709 aaPredicted RBP17.49■□□□□ 0.39
SGMS1-204ENST00000492601 FZD2Q14332 565 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 COL28A1Q2UY09 1125 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 TPRG1LQ5T0D9 272 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 DCP2Q8IU60 420 aaKnown RBP17.49■□□□□ 0.39
SGMS1-204ENST00000492601 UMODL1-AS1Q8N2C9 162 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 FAM174AQ8TBP5 190 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 EXOC2Q96KP1 924 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 GPR27Q9NS67 375 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 MYO6Q9UM54 1294 aa17.49■□□□□ 0.39
SGMS1-204ENST00000492601 LOC400499M0QZD8 3231 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 SPTY2D1-AS1A0A0U1RR47 76 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 SMTNL1A8MU46 457 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 WASH4PA8MWX3 477 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 FGF10O15520 208 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 MMP20O60882 483 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 GIMD1P0DJR0 217 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 RABIFP47224 123 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 INSM1Q01101 510 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 ASIC2Q16515 512 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 CA9Q16790 459 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 PARP15Q460N3 678 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 INO80DQ53TQ3 878 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 CASKIN2Q8WXE0 1202 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 NXPE2Q96DL1 559 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 ARHGEF26Q96DR7 871 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 IFT43Q96FT9 208 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 CELF6Q96J87 481 aaKnown RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 VCPIP1Q96JH7 1222 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 LENG8Q96PV6 779 aaPredicted RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 BPIFA3Q9BQP9 254 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 DHX35Q9H5Z1 703 aaKnown RBP17.48■□□□□ 0.39
SGMS1-204ENST00000492601 HAUS4Q9H6D7 363 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 PARVAQ9NVD7 372 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 LHX3Q9UBR4 397 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 PCSK1NQ9UHG2 260 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 AP4E1Q9UPM8 1137 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 LRP4O75096 1905 aa17.48■□□□□ 0.39
SGMS1-204ENST00000492601 PTPRQQ9UMZ3 2332 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 NEMP2A6NFY4 417 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 AREL1O15033 823 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 PIGNO95427 931 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 ALPPL2P10696 532 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 HOXB3P14651 431 aaPredicted RBP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 HNRNPKP61978 463 aaKnown RBP eCLIP17.47■□□□□ 0.39
SGMS1-204ENST00000492601 SEMG2Q02383 582 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 CYTH1Q15438 398 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 FILIP1LQ4L180 1135 aa17.47■□□□□ 0.39
SGMS1-204ENST00000492601 E4F1Q66K89 784 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms