RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	FGF1	P05230	155 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ERVK-10	P10266	1014 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	FGF3	P11487	239 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GNAZ	P19086	355 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	NDUFV2	P19404	249 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	TFE3	P19532	575 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	LEPR	P48357	1165 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	HSPA13	P48723	471 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SLC5A3	P53794	718 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CLNS1A	P54105	237 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	C1QTNF8	P60827	252 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	KLC1	Q07866	573 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	DSC1	Q08554	894 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	NSUN2	Q08J23	767 aa	Known RBP eCLIP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	OVGP1	Q12889	678 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GRIK2	Q13002	908 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GPR17	Q13304	367 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SERINC3	Q13530	473 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ITGA9	Q13797	1035 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	MAP7	Q14244	749 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	RCN2	Q14257	317 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	LPIN1	Q14693	890 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	LBR	Q14739	615 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CRY1	Q16526	586 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	PLEKHG4	Q58EX7	1191 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	AARS2	Q5JTZ9	985 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	MANEAL	Q5VSG8	457 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	OTUD1	Q5VV17	481 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CST9	Q5W186	159 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	FAM45BP	Q6NSW5	357 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	UGT3A1	Q6NUS8	523 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	IRGC	Q6NXR0	463 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CDHR3	Q6ZTQ4	885 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	TAC4	Q86UU9	113 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ZC3HC1	Q86WB0	502 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	MPP5	Q8N3R9	675 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	KIF2B	Q8N4N8	673 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	KY	Q8NBH2	561 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ZMIZ2	Q8NF64	920 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GPR150	Q8NGU9	434 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	RFWD2	Q8NHY2	731 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	PRR7	Q8TB68	274 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	FAM45A	Q8TCE6	357 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	TSPEAR	Q8WU66	669 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	STYX	Q8WUJ0	223 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	DNAJC9	Q8WXX5	260 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SEPT8	Q92599	483 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	IFT43	Q96FT9	208 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	IMP4	Q96G21	291 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SCYL1	Q96KG9	808 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CYP2S1	Q96SQ9	504 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	EFHD1	Q9BUP0	239 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ADGRE3	Q9BY15	652 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CADM1	Q9BY67	442 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	ACE2	Q9BYF1	805 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	NMUR2	Q9GZQ4	415 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	POLR1E	Q9GZS1	481 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	MFSD1	Q9H3U5	465 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	TASP1	Q9H6P5	420 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SP110	Q9HB58	689 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GOLGA2P5	Q9HBQ8	144 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	TCF7L2	Q9NQB0	619 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	C8orf4	Q9NR00	106 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SMYD2	Q9NRG4	433 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	INTS10	Q9NVR2	710 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	C6orf203	Q9P0P8	240 aa	Predicted RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	GGT7	Q9UJ14	662 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	LRFN2	Q9ULH4	789 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	RUVBL2	Q9Y230	463 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	CDYL	Q9Y232	598 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	DNAJC16	Q9Y2G8	782 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	SCN1A	P35498	2009 aa		6.41	□□□□□ -1.38
FN1-223	ENST00000490833	PDCD11	Q14690	1871 aa	Known RBP	6.41	□□□□□ -1.38
FN1-223	ENST00000490833	MAGEA13P	A6NCF6	341 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	CASTOR2	A6NHX0	329 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	C2orf81	A6NN90	581 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	FOXO6	A8MYZ6	492 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	DIAPH2	O60879	1101 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	RAMP2	O60895	175 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	SMIM24	O75264	130 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	GPC4	O75487	556 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	CLDN11	O75508	207 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	GLP2R	O95838	553 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	POMC	P01189	267 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	PYGL	P06737	847 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	SERPINF2	P08697	491 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	LTA4H	P09960	611 aa	Known RBP	6.4	□□□□□ -1.38
FN1-223	ENST00000490833	PFKL	P17858	780 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	TFEB	P19484	476 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	NCF2	P19878	526 aa	Predicted RBP	6.4	□□□□□ -1.38
FN1-223	ENST00000490833	OGN	P20774	298 aa	Known RBP	6.4	□□□□□ -1.38
FN1-223	ENST00000490833	CD52	P31358	61 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	CTH	P32929	405 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	CD68	P34810	354 aa	Predicted RBP	6.4	□□□□□ -1.38
FN1-223	ENST00000490833	ADRA1A	P35348	466 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	MAPK8	P45983	427 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	PTDSS1	P48651	473 aa	Known RBP	6.4	□□□□□ -1.38
FN1-223	ENST00000490833	FLT3LG	P49771	235 aa		6.4	□□□□□ -1.38
FN1-223	ENST00000490833	IDH3A	P50213	366 aa		6.4	□□□□□ -1.38

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms