RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ANAPC7Q9UJX3 599 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ZFR2Q9UPR6 939 aaKnown RBP17.7■□□□□ 0.42
SEC13-218ENST00000490283 WASF3Q9UPY6 502 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 ACACBO00763 2458 aa17.7■□□□□ 0.42
SEC13-218ENST00000490283 PCNX2A6NKB5 2137 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 A0A087X0T9 212 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 GOLGA8CPA6NN73 597 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 A6NNZ2 444 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 DFFAO00273 331 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 PRAMEF11O60813 436 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 FAM228BP0C875 321 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 RXRGP48443 463 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 HCAR3P49019 387 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 PAPOLAP51003 745 aaKnown RBP17.69■□□□□ 0.42
SEC13-218ENST00000490283 TMEM259Q4ZIN3 620 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 SPECC1LQ69YQ0 1117 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 UNQ6494/PRO21346Q6UXR6 183 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 RAB44Q7Z6P3 723 aaPredicted RBP17.69■□□□□ 0.42
SEC13-218ENST00000490283 TTC7BQ86TV6 843 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 SPATS2Q86XZ4 545 aaKnown RBP17.69■□□□□ 0.42
SEC13-218ENST00000490283 PNPLA1Q8N8W4 532 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 TMEM145Q8NBT3 493 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 SAP25Q8TEE9 199 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 HSPH1Q92598 858 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 NUP85Q9BW27 656 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 DEF6Q9H4E7 631 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 CA5BQ9Y2D0 317 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 MSRB2Q9Y3D2 182 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 MFHAS1Q9Y4C4 1052 aa17.69■□□□□ 0.42
SEC13-218ENST00000490283 MYO1FO00160 1098 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 PALMO75781 387 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 SMTNL2Q2TAL5 461 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 PTAR1Q7Z6K3 402 aaPredicted RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 DCP2Q8IU60 420 aaKnown RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 PAF1Q8N7H5 531 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 NIPA2Q8N8Q9 360 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 EXOC2Q96KP1 924 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 CINPQ9BW66 212 aaPredicted RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 C1QTNF7Q9BXJ2 289 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 CPEB1Q9BZB8 566 aaKnown RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 SLC39A8Q9C0K1 460 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.68■□□□□ 0.42
SEC13-218ENST00000490283 CWC15Q9P013 229 aaKnown RBP17.68■□□□□ 0.42
SEC13-218ENST00000490283 LHX3Q9UBR4 397 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 KLK13Q9UKR3 277 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 HS3ST3A1Q9Y663 406 aa17.68■□□□□ 0.42
SEC13-218ENST00000490283 J3KR12 359 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 FPGTO14772 594 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 LDOC1O95751 146 aaPredicted RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 PAK4O96013 591 aaPredicted RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 CYP1A2P05177 515 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 PROS1P07225 676 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 ATXN1LP0C7T5 689 aaKnown RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 ABL2P42684 1182 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 SUOXP51687 545 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 ELP6Q0PNE2 266 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 RFTN1Q14699 578 aaPredicted RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 CYTH1Q15438 398 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 SHBQ15464 509 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 DPYSL2Q16555 572 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 HADHQ16836 314 aaKnown RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 CCDC157Q569K6 752 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 TMCO3Q6UWJ1 677 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 CYP4V2Q6ZWL3 525 aaPredicted RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 SLCO6A1Q86UG4 719 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 EID2Q8N6I1 236 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 OR13H1Q8NG92 308 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 OR8K1Q8NGG5 319 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 CXorf40AQ8TE69 158 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 TEKT4Q8WW24 435 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 CTNNBL1Q8WYA6 563 aaPredicted RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 PDFQ9HBH1 243 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 DKK3Q9UBP4 350 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 IPO11Q9UI26 975 aaKnown RBP17.67■□□□□ 0.42
SEC13-218ENST00000490283 KNL1Q8NG31 2342 aa17.67■□□□□ 0.42
SEC13-218ENST00000490283 TMEM8BA6NDV4 472 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 IGLON5A6NGN9 336 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 C1QTNF9BB2RNN3 333 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 ENC1O14682 589 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 C1QTNF9P0C862 333 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 HNRNPH3P31942 346 aaKnown RBP17.66■□□□□ 0.42
SEC13-218ENST00000490283 SERPINB6P35237 376 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 EIF4A3P38919 411 aaKnown RBP17.66■□□□□ 0.42
SEC13-218ENST00000490283 RABIFP47224 123 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 CLDN2P57739 230 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 IL10RBQ08334 325 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 DPYSQ14117 519 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 KRT81Q14533 505 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 KYAT3Q6YP21 454 aaKnown RBP17.66■□□□□ 0.42
SEC13-218ENST00000490283 GCNT7Q6ZNI0 430 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 ABI3BPQ7Z7G0 1075 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 NETO2Q8NC67 525 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 DENND6BQ8NEG7 585 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 ZNF564Q8TBZ8 553 aaPredicted RBP17.66■□□□□ 0.42
SEC13-218ENST00000490283 HCAR2Q8TDS4 363 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 ASB12Q8WXK4 309 aa17.66■□□□□ 0.42
SEC13-218ENST00000490283 CNDP2Q96KP4 475 aaKnown RBP17.66■□□□□ 0.42
SEC13-218ENST00000490283 TUBGCP5Q96RT8 1024 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms