RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 EIF3BP55884 814 aaKnown RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 NEXNQ0ZGT2 675 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 RUNX2Q13950 521 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 SIM2Q14190 667 aaPredicted RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 VEPH1Q14D04 833 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 MAPRE1Q15691 268 aaKnown RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 EPHA10Q5JZY3 1008 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 SLC16A12Q6ZSM3 486 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 DIS3L2Q8IYB7 885 aaKnown RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 TMEM199Q8N511 208 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 NRACQ8N912 160 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 MCPH1Q8NEM0 835 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 ENGASEQ8NFI3 743 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 LPAR1Q92633 364 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 SLC25A28Q96A46 364 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 ZNF778Q96MU6 729 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 C1QTNF7Q9BXJ2 289 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 LHPPQ9H008 270 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 MVB12BQ9H7P6 319 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 ZBTB40Q9NUA8 1239 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 SPATS2LQ9NUQ6 558 aaKnown RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 ORC3Q9UBD5 711 aaPredicted RBP4.14□□□□□ -1.75
CD46-216ENST00000490278 ITIH6Q6UXX5 1313 aa4.14□□□□□ -1.75
CD46-216ENST00000490278 A0A087X0M5 115 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 A0A1B0GX30 115 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 TYW5A2RUC4 315 aaKnown RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 F5H0A9 414 aaPredicted RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 BAIAP3O94812 1187 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 SYF2O95926 243 aaKnown RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 HEXAP06865 529 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 CDK4P11802 303 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PCNAP12004 261 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 TNFRSF1BP20333 461 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 RYKP34925 604 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 RXRGP48443 463 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PPP3CCP48454 512 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 EFNA5P52803 228 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 CDH12P55289 794 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 SELENOVP59797 346 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PTGR1Q14914 329 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 DUSP6Q16828 381 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PRTGQ2VWP7 1150 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PLEKHO1Q53GL0 409 aaPredicted RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 WASHC2DQ5SRD0 308 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 ZNF425Q6IV72 752 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 COLCA1Q6ZS62 124 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 C1orf122Q6ZSJ8 110 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 TMTC3Q6ZXV5 915 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 TBC1D26Q86UD7 250 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 PIM3Q86V86 326 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 LURAP1LQ8IV03 231 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 DENND6AQ8IWF6 608 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 KIAA2013Q8IYS2 634 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 RBFAQ8N0V3 343 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 GABPB2Q8TAK5 448 aaPredicted RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 ADAMTS15Q8TE58 950 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 SLC35F5Q8WV83 523 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 INPP5DQ92835 1189 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 VOPP1Q96AW1 172 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 YME1L1Q96TA2 773 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 POLDIP3Q9BY77 421 aaKnown RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 ISCUQ9H1K1 167 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 CDT1Q9H211 546 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 SIRT3Q9NTG7 399 aaPredicted RBP4.13□□□□□ -1.75
CD46-216ENST00000490278 CARD8Q9Y2G2 431 aa4.13□□□□□ -1.75
CD46-216ENST00000490278 TTC36A6NLP5 189 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 HSPA1AP0DMV8 641 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 HSPA1BP0DMV9 641 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 IRF1P10914 325 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CHMP24386 653 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 DCTDP32321 178 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CPOXP36551 454 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 POLD2P49005 469 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CLCN5P51795 746 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CLDN2P57739 230 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CAPSQ13938 189 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 KRT32Q14532 448 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 LPIN1Q14693 890 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TWIST1Q15672 202 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 HIST2H2ACQ16777 129 aaPredicted RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 ZKSCAN2Q63HK3 967 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 HAUS3Q68CZ6 603 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TXNDC8Q6A555 127 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CPLX2Q6PUV4 134 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 SLC46A3Q7Z3Q1 461 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 C1QL2Q7Z5L3 287 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CPLX4Q7Z7G2 160 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TBC1D1Q86TI0 1168 aaPredicted RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 CNTROBQ8N137 903 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TEX45Q8NA69 505 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CADM4Q8NFZ8 388 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 ETNPPLQ8TBG4 499 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TMEM163Q8TC26 289 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 KCNG4Q8TDN1 519 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TMEM18Q96B42 140 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 HMCESQ96FZ2 354 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 GFM1Q96RP9 751 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 H2AFJQ9BTM1 129 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 NUF2Q9BZD4 464 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 NPFFR1Q9GZQ6 430 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms