RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 CDC14CA4D256 554 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 TMEM110-MUSTN1A8MSY1 372 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 B4DGG1 531 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 F5H5T6 163 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 TSPAN6O43657 245 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 EIF5BO60841 1220 aaKnown RBP11.72□□□□□ -0.53
HDAC6-233ENST00000489352 KATNA1O75449 491 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 CBX6O95503 412 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 DRD2P14416 443 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 LIMK2P53671 638 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 OR1D5P58170 312 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 NNTQ13423 1086 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 CLPPQ16740 277 aaPredicted RBP11.72□□□□□ -0.53
HDAC6-233ENST00000489352 RAP1GAP2Q684P5 730 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 MSANTD2Q6P1R3 559 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 ENPP7Q6UWV6 458 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 CEACAM20Q6UY09 585 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 CCAR2Q8N163 923 aaKnown RBP11.72□□□□□ -0.53
HDAC6-233ENST00000489352 ANKRD52Q8NB46 1076 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 CCDC150Q8NCX0 1101 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 OR2A12Q8NGT7 310 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 ATL2Q8NHH9 583 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 ASB12Q8WXK4 309 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 ZPBPQ9BS86 351 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 TWSG1Q9GZX9 223 aa11.72□□□□□ -0.53
HDAC6-233ENST00000489352 LRP4O75096 1905 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 LRRIQ3A6PVS8 624 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-233ENST00000489352 B4E171 279 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 AP1G1O43747 822 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 DPM1O60762 260 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 LEFTY1O75610 366 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 DNAJB5O75953 348 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 ASS1P00966 412 aaKnown RBP11.71□□□□□ -0.53
HDAC6-233ENST00000489352 TNFP01375 233 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 APOEP02649 317 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 TACR2P21452 398 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 PTGER4P35408 488 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 CLCN1P35523 988 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 DLSTP36957 453 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 TXLNAP40222 546 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 TSPAN7P41732 249 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 NEK4P51957 841 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 SNRPFP62306 86 aaKnown RBP11.71□□□□□ -0.53
HDAC6-233ENST00000489352 KRT83P78385 493 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 B4GALNT1Q00973 533 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 RABGAP1LQ5R372 815 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 JMJD6Q6NYC1 403 aaPredicted RBP11.71□□□□□ -0.53
HDAC6-233ENST00000489352 BHLHA9Q7RTU4 235 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 ESX1Q8N693 406 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 RTP4Q96DX8 246 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 SERPINB11Q96P15 392 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 CTRCQ99895 268 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 OCIAD1Q9NX40 245 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 HESX1Q9UBX0 185 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 G3BP2Q9UN86 482 aaKnown RBP11.71□□□□□ -0.53
HDAC6-233ENST00000489352 TLR6Q9Y2C9 796 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 RPS6KL1Q9Y6S9 549 aa11.71□□□□□ -0.53
HDAC6-233ENST00000489352 PIPSLA2A3N6 862 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 XPO1O14980 1071 aaKnown RBP11.7□□□□□ -0.54
HDAC6-233ENST00000489352 B4GAT1O43505 415 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 FAM155BO75949 473 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 STK17BO94768 372 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 LCP1P13796 627 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 MPSTP25325 297 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 ITGA3P26006 1051 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 L1CAMP32004 1257 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 STAT5AP42229 794 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 ANAPC15P60006 121 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 SRP54P61011 504 aaKnown RBP11.7□□□□□ -0.54
HDAC6-233ENST00000489352 ZRSR2Q15696 482 aaKnown RBP11.7□□□□□ -0.54
HDAC6-233ENST00000489352 TTC39BQ5VTQ0 682 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-233ENST00000489352 APLFQ8IW19 511 aaPredicted RBP11.7□□□□□ -0.54
HDAC6-233ENST00000489352 CHST14Q8NCH0 376 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 KIAA1524Q8TCG1 905 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 CENPTQ96BT3 561 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 HDAC11Q96DB2 347 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 EPSTI1Q96J88 318 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 FEM1AQ9BSK4 669 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 MUC3BQ9H195 1237 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 CNGB3Q9NQW8 809 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 KLQ9UEF7 1012 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 SLC12A6Q9UHW9 1150 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 ZNF451Q9Y4E5 1061 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 PKDREJQ9NTG1 2253 aa11.7□□□□□ -0.54
HDAC6-233ENST00000489352 FRMD3A2A2Y4 597 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 TCAF2A6NFQ2 919 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 LRRTM2O43300 516 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 KRT86O43790 486 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 PPP6R2O75170 966 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 BMP15O95972 392 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 SRCP12931 536 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 IGFALSP35858 605 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 PEX5P50542 639 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 HDAC4P56524 1084 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 IRX6P78412 446 aaPredicted RBP11.69□□□□□ -0.54
HDAC6-233ENST00000489352 SEMA5AQ13591 1074 aa11.69□□□□□ -0.54
HDAC6-233ENST00000489352 HLTFQ14527 1009 aaKnown RBP eCLIP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms