RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 USP38Q8NB14 1042 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 DNAAF1Q8NEP3 725 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 GDPD5Q8WTR4 605 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 TMEM170AQ8WVE7 144 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 TMED6Q8WW62 240 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 HERVK_113Q902F9 699 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 CNOT9Q92600 299 aaKnown RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 FAM84BQ96KN1 310 aaPredicted RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 YME1L1Q96TA2 773 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 EPHX3Q9H6B9 360 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 WWOXQ9NZC7 414 aa3.85□□□□□ -1.79
RFC4-213ENST00000489028 AGO1Q9UL18 857 aaKnown RBP3.85□□□□□ -1.79
RFC4-213ENST00000489028 IGLV5-52A0A0A0MRZ9 124 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 DYTNA2CJ06 578 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PABPN1LA6NDY0 278 aaKnown RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 PRR23D1E9PI22 279 aaPredicted RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 KIF1CO43896 1103 aaKnown RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 CEP104O60308 925 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PRSS2P07478 247 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PRR23D2P0DMB1 279 aaPredicted RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 FCGR1AP12314 374 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 EDN2P20800 178 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 KCNJ4P48050 445 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 CLCN5P51795 746 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 ADORA2A-AS1P86434 159 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 DSC1Q08554 894 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PPFIA1Q13136 1202 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PLCB4Q15147 1175 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 ZNF667Q5HYK9 610 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 CAPRIN2Q6IMN6 1127 aaKnown RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 PRSS57Q6UWY2 283 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 C18orf65Q6ZTR6 163 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PRSS45Q7RTY3 260 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 PATL1Q86TB9 770 aaKnown RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 DENND6AQ8IWF6 608 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 IL25Q9H293 177 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 TAOK3Q9H2K8 898 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 TTYH1Q9H313 450 aaPredicted RBP3.84□□□□□ -1.79
RFC4-213ENST00000489028 ENTPD7Q9NQZ7 604 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 TMEM51Q9NW97 253 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 OCIAD1Q9NX40 245 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 HSF4Q9ULV5 492 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 CNTNAP2Q9UHC6 1331 aa3.84□□□□□ -1.79
RFC4-213ENST00000489028 C17orf113A0A1B0GUU1 675 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 PRSS44E7EML9 344 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 EIF3FO00303 357 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 EBAG9O00559 213 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 KCNJ13O60928 360 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 ZBTB11O95625 1053 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 TGFB3P10600 412 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 C21orf33P30042 268 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 RYKP34925 604 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 CYP4A11Q02928 519 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 NAA25Q14CX7 972 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 PLEKHO1Q53GL0 409 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 WDR45BQ5MNZ6 344 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 C9orf57Q5W0N0 161 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 ATG16L1Q676U5 607 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 NCAPH2Q6IBW4 605 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 IL20RBQ6UXL0 311 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 C16orf82Q7Z2V1 217 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 MB21D2Q8IYB1 491 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 CPXM2Q8N436 756 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 ARRDC2Q8TBH0 407 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 FAM216AQ8WUB2 273 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 RUFY2Q8WXA3 655 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 RNF183Q96D59 192 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 ELP4Q96EB1 424 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 TXNDC15Q96J42 360 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 ZSCAN31Q96LW9 406 aaPredicted RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 FIZ1Q96SL8 496 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 EYA3Q99504 573 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 SLC25A33Q9BSK2 321 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 TM6SF1Q9BZW5 370 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 RIC8AQ9NPQ8 531 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 SPATS2LQ9NUQ6 558 aaKnown RBP3.83□□□□□ -1.8
RFC4-213ENST00000489028 SLC45A1Q9Y2W3 748 aa3.83□□□□□ -1.8
RFC4-213ENST00000489028 A0A1B0GVM2 712 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 ACOT8O14734 319 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 TSPAN3O60637 253 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 SRD5A1P18405 259 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 LIFRP42702 1097 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 ART1P52961 327 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 TDGQ13569 410 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 LRRTM4Q86VH4 590 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 SMRP1Q8NCR6 262 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 ZMIZ2Q8NF64 920 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 RFWD2Q8NHY2 731 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 SH3KBP1Q96B97 665 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 LMLNQ96KR4 655 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 LBHD1Q9BQE6 289 aaPredicted RBP3.82□□□□□ -1.8
RFC4-213ENST00000489028 CDT1Q9H211 546 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 C6orf106Q9H6K1 298 aaPredicted RBP3.82□□□□□ -1.8
RFC4-213ENST00000489028 TMEM160Q9NX00 188 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 ANKRD10Q9NXR5 420 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 ALKBH4Q9NXW9 302 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 IFT80Q9P2H3 777 aaPredicted RBP3.82□□□□□ -1.8
RFC4-213ENST00000489028 SUFUQ9UMX1 484 aa3.82□□□□□ -1.8
RFC4-213ENST00000489028 PCDHGB1Q9Y5G3 927 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms