RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 OR2AP1Q8NGE2 309 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 CENPTQ96BT3 561 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 SLC13A1Q9BZW2 595 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 SEMA4CQ9C0C4 833 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 HPCAL4Q9UM19 191 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 ATMQ13315 3056 aa19.35■□□□□ 0.69
GGPS1-206ENST00000488594 CCDC187A0A096LP49 1063 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 POP4O95707 220 aaKnown RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 LSM8O95777 96 aaKnown RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 CD160O95971 181 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 GSRP00390 522 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 ANXA6P08133 673 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 ITGA2BP08514 1039 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 PNMA6AP0CW24 399 aaPredicted RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 CYP11B1P15538 503 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 MTIF2P46199 727 aaKnown RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 SNRPD1P62314 119 aaKnown RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 SPIDRQ14159 915 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 PERM1Q5SV97 790 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 ESRP1Q6NXG1 681 aaKnown RBP19.34■□□□□ 0.69
GGPS1-206ENST00000488594 CRTC1Q6UUV9 634 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 FAM131BQ86XD5 332 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 SLC35F3Q8IY50 421 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 RBFAQ8N0V3 343 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 LRRC61Q9BV99 259 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 TMEM59LQ9UK28 342 aa19.34■□□□□ 0.69
GGPS1-206ENST00000488594 KRIT1O00522 736 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 AREL1O15033 823 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 GCATO75600 419 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 TNFSF15O95150 251 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 MAPKAPK2P49137 400 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 ADKP55263 362 aaKnown RBP19.33■□□□□ 0.69
GGPS1-206ENST00000488594 NRG1Q02297 640 aaPredicted RBP19.33■□□□□ 0.69
GGPS1-206ENST00000488594 ARL13BQ3SXY8 428 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 FOXR1Q6PIV2 292 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 MACC1Q6ZN28 852 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 IRF2BP1Q8IU81 584 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 OR6K2Q8NGY2 324 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 ARHGEF2Q92974 986 aaKnown RBP19.33■□□□□ 0.69
GGPS1-206ENST00000488594 CFAP57Q96MR6 1250 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 CCDC3Q9BQI4 270 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.33■□□□□ 0.69
GGPS1-206ENST00000488594 GGT7Q9UJ14 662 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 PADI4Q9UM07 663 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 ITM2BQ9Y287 266 aa19.33■□□□□ 0.69
GGPS1-206ENST00000488594 RHOQP17081 205 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 GKP32189 559 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 ACVRL1P37023 503 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 BLKP51451 505 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 PPARDQ03181 441 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 CLN3Q13286 438 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 EIF3IQ13347 325 aaKnown RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 C1orf61Q13536 156 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 MAN2A1Q16706 1144 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 MYLK3Q32MK0 819 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 FAXCQ5TGI0 409 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TRNP1Q6NT89 227 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TTC7BQ86TV6 843 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 FSTL5Q8N475 847 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 SCG3Q8WXD2 468 aaKnown RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 LIN37Q96GY3 246 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 MAGEH1Q9H213 219 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TCEAL2Q9H3H9 227 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 CLMPQ9H6B4 373 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 OR12D3Q9UGF7 316 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 ACTL7AQ9Y615 435 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 GOLGA8SH3BPF8 625 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TMX2-CTNND1H3BSU7 103 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 YY2O15391 372 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TM7SF2O76062 418 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 UGT2B4P06133 528 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 PRKCSHP14314 528 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 TSHRP16473 764 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 IGFALSP35858 605 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 PDX1P52945 283 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 RAPGEF1Q13905 1077 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 BECN1Q14457 450 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 DRAP1Q14919 205 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 MANEALQ5VSG8 457 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 RWDD4Q6NW29 188 aaKnown RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 LVRNQ6Q4G3 990 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 VPS36Q86VN1 386 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 ARL10Q8N8L6 244 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 KLHL32Q96NJ5 620 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 CCNL2Q96S94 520 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 KIAA1468Q9P260 1216 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 ATXN7L1Q9ULK2 861 aaPredicted RBP19.32■□□□□ 0.68
GGPS1-206ENST00000488594 DOLKQ9UPQ8 538 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 PCDHGA7Q9Y5G6 932 aa19.32■□□□□ 0.68
GGPS1-206ENST00000488594 COL27A1Q8IZC6 1860 aaPredicted RBP19.31■□□□□ 0.68
GGPS1-206ENST00000488594 ZSCAN5CA6NGD5 496 aaPredicted RBP19.31■□□□□ 0.68
GGPS1-206ENST00000488594 NTN3O00634 580 aaPredicted RBP19.31■□□□□ 0.68
GGPS1-206ENST00000488594 RAMP2O60895 175 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 ADRA1BP35368 520 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 EIF4A3P38919 411 aaKnown RBP19.31■□□□□ 0.68
GGPS1-206ENST00000488594 RAD51Q06609 339 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 ELOCQ15369 112 aa19.31■□□□□ 0.68
GGPS1-206ENST00000488594 TPD52L1Q16890 204 aaPredicted RBP19.31■□□□□ 0.68
GGPS1-206ENST00000488594 KIAA1614Q5VZ46 1190 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms