RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 F7P08709 466 aaPredicted RBP20.47■□□□□ 0.87
NECAB3-213ENST00000488489 MZF1P28698 734 aaPredicted RBP20.47■□□□□ 0.87
NECAB3-213ENST00000488489 FRG1Q14331 258 aaKnown RBP20.47■□□□□ 0.87
NECAB3-213ENST00000488489 SHHQ15465 462 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 SLC5A9Q2M3M2 681 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 PKN3Q6P5Z2 889 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 PACS1Q6VY07 963 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 RASSF3Q86WH2 238 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 NSMCE3Q96MG7 304 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 MUC3BQ9H195 1237 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 GRID1Q9ULK0 1009 aa20.47■□□□□ 0.87
NECAB3-213ENST00000488489 H0Y626 953 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 LEFTY2O00292 366 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 LPXNO60711 386 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 KRT38O76015 456 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 CD160O95971 181 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 RGRP47804 291 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 ELF3P78545 371 aaPredicted RBP20.46■□□□□ 0.87
NECAB3-213ENST00000488489 ARF5P84085 180 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 SLC18A2Q05940 514 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 MSLNQ13421 630 aaPredicted RBP20.46■□□□□ 0.87
NECAB3-213ENST00000488489 HSP90AA5PQ58FG0 334 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 LGSNQ5TDP6 509 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 ZNF449Q6P9G9 518 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 HJURPQ8NCD3 748 aaPredicted RBP20.46■□□□□ 0.87
NECAB3-213ENST00000488489 CKAP2Q8WWK9 683 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 PSKH2Q96QS6 385 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 UBA2Q9UBT2 640 aaPredicted RBP20.46■□□□□ 0.87
NECAB3-213ENST00000488489 LSM7Q9UK45 103 aaKnown RBP20.46■□□□□ 0.87
NECAB3-213ENST00000488489 SH3BP1Q9Y3L3 701 aa20.46■□□□□ 0.87
NECAB3-213ENST00000488489 GOLGA8TH3BQL2 631 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 SNX3O60493 162 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 SNAP91O60641 907 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 LUC7L3O95232 432 aaKnown RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 RHOP08100 348 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 PTPN2P17706 415 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 TEAD2Q15562 447 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 GPR158Q5T848 1215 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 TEDDM1Q5T9Z0 273 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 ZNF697Q5TEC3 545 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 ALG1LQ6GMV1 187 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 POTEHQ6S545 545 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 CCDC117Q8IWD4 279 aaPredicted RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 RIN3Q8TB24 985 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 TCP10LQ8TDR4 215 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 MGME1Q9BQP7 344 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 FEM1AQ9BSK4 669 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 GBP2P32456 591 aaPredicted RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 SERPINB9P50453 376 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 NTHL1P78549 312 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 LINGO4Q6UY18 593 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 RBM23Q86U06 439 aaKnown RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 ALKBH8Q96BT7 664 aaKnown RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 PAIP2Q9BPZ3 127 aaKnown RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 C20orf96Q9NUD7 363 aaPredicted RBP20.45■□□□□ 0.86
NECAB3-213ENST00000488489 PLK2Q9NYY3 685 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 SLC2A6Q9UGQ3 507 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 SEPT3Q9UH03 358 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 CLEC4EQ9ULY5 219 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 TCAF1Q9Y4C2 921 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 OR51B4Q9Y5P0 310 aa20.45■□□□□ 0.86
NECAB3-213ENST00000488489 PRRC2BQ5JSZ5 2229 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 LOC285095A0A1B0GVY8 99 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 ZMPSTE24O75844 475 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CYTH1Q15438 398 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 ESRP1Q6NXG1 681 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 RTL10Q7L3V2 364 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 KCNMB4Q86W47 210 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CMTM8Q8IZV2 173 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CCDC63Q8NA47 563 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 TDRD5Q8NAT2 981 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 MTBPQ96DY7 904 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 ALG14Q96F25 216 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 EXOC2Q96KP1 924 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 TGS1Q96RS0 853 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CERS4Q9HA82 394 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 SLC17A7Q9P2U7 560 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 ARHGAP26Q9UNA1 814 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 YBX2Q9Y2T7 364 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CFAP73A6NFT4 308 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 ATXN1LP0C7T5 689 aaKnown RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 SLC8A1P32418 973 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 PBX2P40425 430 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 NAB1Q13506 487 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 SIRPB2Q5JXA9 342 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 TPGS1Q6ZTW0 290 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 SH3RF2Q8TEC5 729 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 DDI1Q8WTU0 396 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 CINPQ9BW66 212 aaPredicted RBP20.44■□□□□ 0.86
NECAB3-213ENST00000488489 NOD2Q9HC29 1040 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 MCM8Q9UJA3 840 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 MYOFQ9NZM1 2061 aa20.44■□□□□ 0.86
NECAB3-213ENST00000488489 PFKLP17858 780 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 ARNTP27540 789 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 FOXN2P32314 431 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 SERPINH1P50454 418 aaKnown RBP20.43■□□□□ 0.86
NECAB3-213ENST00000488489 GPM6BQ13491 265 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 CDH18Q13634 790 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 LVRNQ6Q4G3 990 aa20.43■□□□□ 0.86
NECAB3-213ENST00000488489 ZNF783Q6ZMS7 281 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms