RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 STEAP4Q687X5 459 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 ASTLQ6HA08 431 aaPredicted RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 TANGO2Q6ICL3 276 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 C22orf39Q6P5X5 142 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 VITQ6UXI7 678 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 CROCCP2Q86T23 111 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 RASSF3Q86WH2 238 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 RYBPQ8N488 228 aaPredicted RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 CPA6Q8N4T0 437 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 SH2D3CQ8N5H7 860 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 PAF1Q8N7H5 531 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 LPCAT1Q8NF37 534 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 OR6K2Q8NGY2 324 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TTC8Q8TAM2 541 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 GSDMBQ8TAX9 411 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 ARL8AQ96BM9 186 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 LRCH3Q96II8 777 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 FEM1CQ96JP0 617 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 MSLNLQ96KJ4 702 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 XPO6Q96QU8 1125 aaKnown RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 NUDCD1Q96RS6 583 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 PAFAH2Q99487 392 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 CCDC77Q9BR77 488 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TDRD1Q9BXT4 1180 aaKnown RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 CIPCQ9C0C6 399 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 IL22Q9GZX6 179 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 S1PR5Q9H228 398 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TNKS2Q9H2K2 1166 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 ACSS3Q9H6R3 686 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TRPV4Q9HBA0 871 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TMBIM4Q9HC24 238 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 NOD2Q9HC29 1040 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 THG1LQ9NWX6 298 aaKnown RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 OGFRQ9NZT2 677 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 VPS18Q9P253 973 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 CD207Q9UJ71 328 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 INTS6Q9UL03 887 aaKnown RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 USP15Q9Y4E8 981 aaPredicted RBP7□□□□□ -1.29
PDAP1-203ENST00000488214 RPS6KL1Q9Y6S9 549 aa7□□□□□ -1.29
PDAP1-203ENST00000488214 TRIM24O15164 1050 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 POLR3GO15318 223 aaPredicted RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SMAD6O43541 496 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 BNIP3LO60238 219 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 ABCB7O75027 752 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CDH16O75309 829 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 PIAS1O75925 651 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 PIGNO95427 931 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CD160O95971 181 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 MT-CO1P00395 513 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 PRKCGP05129 697 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 FGF1P05230 155 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 POLBP06746 335 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 GSTA2P09210 222 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 ATXN1LP0C7T5 689 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SRCP12931 536 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 LAMP2P13473 410 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 POLR2EP19388 210 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CR2P20023 1033 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 HLA-DPA1P20036 260 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CA4P22748 312 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 HPDP32754 393 aaPredicted RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 LTBRP36941 435 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 NPY2RP49146 381 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 AP1S1P61966 158 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SULT2A1Q06520 285 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CDK18Q07002 472 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 FCHO2Q0JRZ9 810 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 TRAF2Q12933 501 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 DMC1Q14565 340 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 IHHQ14623 411 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SKIV2LQ15477 1246 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SLC1A5Q15758 541 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 GEN1Q17RS7 908 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CTC1Q2NKJ3 1217 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 KBTBD12Q3ZCT8 623 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 INO80DQ53TQ3 878 aaPredicted RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SIRPB2Q5JXA9 342 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SPANXN3Q5MJ09 141 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 AGBL2Q5U5Z8 902 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 MBLAC2Q68D91 279 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 GRAMD4Q6IC98 578 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 TRMT10BQ6PF06 316 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 PARM1Q6UWI2 310 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CES3Q6UWW8 571 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 C3orf62Q6ZUJ4 267 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 METTL3Q86U44 580 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CCNJLQ8IV13 435 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CTAGE3PQ8IX95 158 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 KIAA1958Q8N8K9 716 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 SMRP1Q8NCR6 262 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 WFIKKN2Q8TEU8 576 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 CYB5D2Q8WUJ1 264 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 PDCD6IPQ8WUM4 868 aaKnown RBP6.99□□□□□ -1.29
PDAP1-203ENST00000488214 FGF14Q92915 247 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 E2F7Q96AV8 911 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 TADA1Q96BN2 335 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 MYO19Q96H55 970 aa6.99□□□□□ -1.29
PDAP1-203ENST00000488214 LMLNQ96KR4 655 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms