RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 MAMLD1Q13495 774 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 SMAD1Q15797 465 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 CA9Q16790 459 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF805Q5CZA5 627 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 KIAA1161Q6NSJ0 714 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF571Q7Z3V5 609 aaPredicted RBP11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 TTC7BQ86TV6 843 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 BMFQ96LC9 184 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 SYT11Q9BT88 431 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 DHX35Q9H5Z1 703 aaKnown RBP11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 CATSPERBQ9H7T0 1116 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 KLHL11Q9NVR0 708 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 DNAJC28Q9NX36 388 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 MYO1AQ9UBC5 1043 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 AP4E1Q9UPM8 1137 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 RAXQ9Y2V3 346 aa11.47□□□□□ -0.57
NIPAL3-207ENST00000488155 ZSCAN5CA6NGD5 496 aaPredicted RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 A6NNZ2 444 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 EEF2KO00418 725 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 MMP20O60882 483 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PIAS2O75928 621 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PIGNO95427 931 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 IGSF6O95976 241 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 SERPINC1P01008 464 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 FTLP02792 175 aaPredicted RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 CKMT2P17540 419 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 DESP17661 470 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 SEMG2Q02383 582 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 RAD51Q06609 339 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 SERINC3Q13530 473 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 TPRG1LQ5T0D9 272 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 HES3Q5TGS1 186 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 GDPD4Q6W3E5 623 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 ABI3BPQ7Z7G0 1075 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PLPP6Q8IY26 295 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 HNRNPLLQ8WVV9 542 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 TSC1Q92574 1164 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 VOPP1Q96AW1 172 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 ZNF653Q96CK0 615 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 GDAP1L1Q96MZ0 367 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 BPIFA3Q9BQP9 254 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 TTYH3Q9C0H2 523 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 RETREG1Q9H6L5 497 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PARVAQ9NVD7 372 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 CNOT8Q9UFF9 292 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 IPO11Q9UI26 975 aaKnown RBP11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 LHX6Q9UPM6 363 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 PCDHGA1Q9Y5H4 931 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 HS3ST3A1Q9Y663 406 aa11.46□□□□□ -0.57
NIPAL3-207ENST00000488155 ZFHX4Q86UP3 3567 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PTPRQQ9UMZ3 2332 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 A0A1B0GTH6 734 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 SYCE3A1L190 88 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 WASH4PA8MWX3 477 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 J3KR12 359 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 DDX3XO00571 662 aaKnown RBP eCLIP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 FPGTO14772 594 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 SPINT1O43278 529 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 DAPK3O43293 454 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 TSPAN6O43657 245 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 AP1G1O43747 822 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PRKCGP05129 697 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 TIMP2P16035 220 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 YBEYP58557 167 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 KLHL30Q0D2K2 578 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 TARDBPQ13148 414 aaKnown RBP eCLIP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PDE1CQ14123 709 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 IQCB1Q15051 598 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 CYTH1Q15438 398 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 HS1BP3Q53T59 392 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PPP6R3Q5H9R7 873 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PLEKHA7Q6IQ23 1121 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 VPS36Q86VN1 386 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 TMPRSS12Q86WS5 348 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 ARFGAP1Q8N6T3 406 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 PDCD7Q8N8D1 485 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 RAB7BQ96AH8 199 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 LRIG1Q96JA1 1093 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 VCPIP1Q96JH7 1222 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 KCTD15Q96SI1 283 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 KLF6Q99612 283 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 NCAPGQ9BPX3 1015 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 SNRNP25Q9BV90 132 aaKnown RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 C1QTNF2Q9BXJ5 285 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 SLC39A8Q9C0K1 460 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 LHX3Q9UBR4 397 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 UBA2Q9UBT2 640 aaPredicted RBP11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 MYO6Q9UM54 1294 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
NIPAL3-207ENST00000488155 TMEM191CA6NGB0 347 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 FGF10O15520 208 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 RNF8O76064 485 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 C1SP09871 688 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 GIMD1P0DJR0 217 aa11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 XPAP23025 273 aaPredicted RBP11.44□□□□□ -0.58
NIPAL3-207ENST00000488155 MIPP30301 263 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms