RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FAM160B2Q86V87 743 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ADHFE1Q8IWW8 467 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 CADM3Q8N126 398 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 HORMAD2Q8N7B1 307 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 SLC44A5Q8NCS7 719 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 PPHLN1Q8NEY8 458 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TNIP2Q8NFZ5 429 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 RASSF8Q8NHQ8 419 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 TDRD7Q8NHU6 1098 aaKnown RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ZCCHC10Q8TBK6 192 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 GDPD5Q8WTR4 605 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 UCMAQ8WVF2 138 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 SKA1Q96BD8 255 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 KIF1BPQ96EK5 621 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 PERPQ96FX8 193 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 KLHL15Q96M94 604 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 NR1H4Q96RI1 486 aaPredicted RBP3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 UBA5Q9GZZ9 404 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 LHPPQ9H008 270 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 UNC45AQ9H3U1 944 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ENTPD7Q9NQZ7 604 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ZBTB40Q9NUA8 1239 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 C20orf141Q9NUB4 165 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 IL1RAPL1Q9NZN1 696 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 MDFICQ9P1T7 246 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 HCN3Q9P1Z3 774 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 AASSQ9UDR5 926 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 RAP2CQ9Y3L5 183 aa3.05□□□□□ -1.92
R3HDM1-219ENST00000488035 ZNF335Q9H4Z2 1342 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 TEX13CA0A0J9YWL9 993 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 A0A1W2PPH5 198 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 NPIPB15A6NHN6 443 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 PRPF4O43172 522 aaKnown RBP eCLIP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 SMAD6O43541 496 aaKnown RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 NDUFB8O95169 186 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 EPN2O95208 641 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 LCKP06239 509 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 GALTP07902 379 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 CTPS1P17812 591 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 CAPN3P20807 821 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 TTKP33981 857 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 RXRGP48443 463 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 PPP3CCP48454 512 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 CXCR3P49682 368 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 HTR6P50406 440 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 CLDN2P57739 230 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 CYP4A11Q02928 519 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 SRSF1Q07955 248 aaKnown RBP eCLIP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 LMOD3Q0VAK6 560 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 RALBP1Q15311 655 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 TBCEQ15813 527 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 LRRC8EQ6NSJ5 796 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 IL20RBQ6UXL0 311 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 ARMC8Q8IUR7 673 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 FAM217AQ8IXS0 508 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 DPP10Q8N608 796 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 ANKRD52Q8NB46 1076 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 ENGASEQ8NFI3 743 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 NFKBIDQ8NI38 313 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 METTL6Q8TCB7 284 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 TMEM174Q8WUU8 243 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 INPP5DQ92835 1189 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 ZFYVE19Q96K21 471 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 WDR77Q9BQA1 342 aaPredicted RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 TRMOQ9BU70 441 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 POLDIP3Q9BY77 421 aaKnown RBP3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 NUF2Q9BZD4 464 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 B3GNT4Q9C0J1 378 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 BRF2Q9HAW0 419 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 VEZTQ9HBM0 779 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 POT1Q9NUX5 634 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 KCND2Q9NZV8 630 aa3.04□□□□□ -1.92
R3HDM1-219ENST00000488035 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 HSPB6O14558 160 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 TSPAN4O14817 238 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 MDM4O15151 490 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 RNMTO43148 476 aaKnown RBP3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 SEC31AO94979 1220 aaKnown RBP3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 CRYABP02511 175 aaKnown RBP3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 UBL4AP11441 157 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 COX7A2P14406 83 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 MAPK4P31152 587 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 DCTDP32321 178 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 MAN1A1P33908 653 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 RYKP34925 604 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 DDIT3P35638 169 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 RFX5P48382 616 aaPredicted RBP3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 BLKP51451 505 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 CLCN5P51795 746 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 DCAF7P61962 342 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 GRIK3Q13003 919 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 KRT32Q14532 448 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 EDRF1Q3B7T1 1238 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 LEXMQ3ZCV2 418 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 SERTAD4-AS1Q5TG53 156 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 CCDC30Q5VVM6 783 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 NAA35Q5VZE5 725 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 HAUS3Q68CZ6 603 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 HIST2H2BCQ6DN03 193 aa3.03□□□□□ -1.92
R3HDM1-219ENST00000488035 HIST2H2BDQ6DRA6 164 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms