RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PRSS22Q9GZN4 317 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 SPRTNQ9H040 489 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ENTPD7Q9NQZ7 604 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PRMT8Q9NR22 394 aaPredicted RBP5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ATP8A2Q9NTI2 1148 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 RAB23Q9ULC3 237 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 CCPG1Q9ULG6 757 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 L1RE1Q9UN81 338 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 PIEZO2Q9H5I5 2752 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ZBED9Q6R2W3 1325 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 ACACAQ13085 2346 aa5.18□□□□□ -1.58
BRCA1-217ENST00000487825 SDK1Q7Z5N4 2213 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 PLIN4Q96Q06 1357 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 LOC102723971A0A1B0GUV8 181 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 A6NNZ2 444 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 TMEM232C9JQI7 657 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 GCATO75600 419 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 USP1O94782 785 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 TOP3BO95985 862 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 CHRNA1P02708 482 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 CHRM5P08912 532 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 CALML3P27482 149 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 UQCRC1P31930 480 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 PTDSS1P48651 473 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 GATMP50440 423 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 COPB1P53618 953 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 MGAT3Q09327 533 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 LPIN1Q14693 890 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 DAZAP2Q15038 168 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 PPP2R5AQ15172 486 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 NONOQ15233 471 aaKnown RBP eCLIP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 LPAL2Q16609 132 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 FAM187BQ17R55 369 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 INSCQ1MX18 579 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 DCLRE1AQ6PJP8 1040 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 THNSL1Q8IYQ7 743 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 C12orf76Q8N812 135 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 Q8N9P0 234 aaPredicted RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 COLGALT1Q8NBJ5 622 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 ZBTB9Q96C00 473 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 FCRL4Q96PJ5 515 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 C16orf70Q9BSU1 422 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 DDX23Q9BUQ8 820 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 TRIM5Q9C035 493 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 C1orf112Q9NSG2 853 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 ASIC5Q9NY37 505 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 DNMT3BQ9UBC3 853 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 CLIP2Q9UDT6 1046 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 DBNLQ9UJU6 430 aaKnown RBP5.17□□□□□ -1.58
BRCA1-217ENST00000487825 TSC2P49815 1807 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 NRCAMQ92823 1304 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 COL4A2P08572 1712 aa5.17□□□□□ -1.58
BRCA1-217ENST00000487825 EVPLQ92817 2033 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 COL12A1Q99715 3063 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 KANSL1LA0AUZ9 987 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 PCNX2A6NKB5 2137 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 EIF4E1BA6NMX2 242 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 B4DLN1 442 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 PRKAB2O43741 272 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 N4BP1O75113 896 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 MOSPD3O75425 235 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 S100BP04271 92 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 STAG3L1P0CL83 205 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SMIM10L2AP0DMW4 78 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SMIM10L2BP0DMW5 78 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 TDGF1P13385 188 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 HGFP14210 728 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 EPHA3P29320 983 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 MRPL12P52815 198 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SNAP25P60880 206 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 RPS6P62753 249 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 LMAN2Q12907 356 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 IKQ13123 557 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SMC1AQ14683 1233 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 RABEP1Q15276 862 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 CNGA2Q16280 664 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 NFE2Q16621 373 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 LETM2Q2VYF4 491 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 AASDHQ4L235 1098 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SPOUT1Q5T280 376 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 TSSK4Q6SA08 328 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SEPT14Q6ZU15 432 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SFTPA1Q8IWL2 248 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 ADAMTS18Q8TE60 1221 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 ZNF48Q96MX3 618 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 FYTTD1Q96QD9 318 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 MEIS3Q99687 375 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 EFHD1Q9BUP0 239 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 SCNM1Q9BWG6 230 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 FTHL17Q9BXU8 183 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 VPS16Q9H269 839 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 RANBP17Q9H2T7 1088 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 FAM204AQ9H8W3 233 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 MTMR4Q9NYA4 1195 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 ELOVL5Q9NYP7 299 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 EPS15L1Q9UBC2 864 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 AFF4Q9UHB7 1163 aaKnown RBP5.16□□□□□ -1.58
BRCA1-217ENST00000487825 TEX15Q9BXT5 2789 aa5.16□□□□□ -1.58
BRCA1-217ENST00000487825 ZNF532Q9HCE3 1301 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms