RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 OTUD7AQ8TE49 926 aaPredicted RBP4.36□□□□□ -1.71
SMC4-219ENST00000487747 DDX23Q9BUQ8 820 aaKnown RBP4.36□□□□□ -1.71
SMC4-219ENST00000487747 ATP8A2Q9NTI2 1148 aa4.36□□□□□ -1.71
SMC4-219ENST00000487747 GREB1LQ9C091 1923 aaPredicted RBP4.35□□□□□ -1.71
SMC4-219ENST00000487747 E7EVH7 732 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 SLC25A17O43808 307 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 AMD1P17707 334 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 GJC1P36383 396 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 PNPLA4P41247 253 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 GPR12P47775 334 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 PRKAA2P54646 552 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 RUNDC3AQ59EK9 446 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 MON1AQ86VX9 555 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 DCUN1D3Q8IWE4 304 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 MB21D2Q8IYB1 491 aaPredicted RBP4.35□□□□□ -1.71
SMC4-219ENST00000487747 LINS1Q8NG48 757 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 PGLYRP2Q96PD5 576 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 CTDSP1Q9GZU7 261 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 GEMIN8Q9NWZ8 242 aaKnown RBP4.35□□□□□ -1.71
SMC4-219ENST00000487747 DACT1Q9NYF0 836 aa4.35□□□□□ -1.71
SMC4-219ENST00000487747 MORC2Q9Y6X9 1032 aaPredicted RBP4.35□□□□□ -1.71
SMC4-219ENST00000487747 HMX3A6NHT5 357 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 IL1AP01583 271 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 CTPS1P17812 591 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 GLIPR1P48060 266 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 PEX5P50542 639 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 TNFAIP2Q03169 654 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 THOC5Q13769 683 aaKnown RBP4.34□□□□□ -1.71
SMC4-219ENST00000487747 RBBP5Q15291 538 aaKnown RBP4.34□□□□□ -1.71
SMC4-219ENST00000487747 SMAD1Q15797 465 aaKnown RBP4.34□□□□□ -1.71
SMC4-219ENST00000487747 ZNF484Q5JVG2 852 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 NAPEPLDQ6IQ20 393 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 EXOC3L1Q86VI1 746 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 ZNF441Q8N8Z8 693 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 ARRDC2Q8TBH0 407 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 TRIB2Q92519 343 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 CD101Q93033 1021 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 KTI12Q96EK9 354 aaPredicted RBP4.34□□□□□ -1.71
SMC4-219ENST00000487747 YME1L1Q96TA2 773 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 RMDN3Q96TC7 470 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 CSF3RQ99062 836 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 CRB3Q9BUF7 120 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 TAF1DQ9H5J8 278 aaPredicted RBP4.34□□□□□ -1.71
SMC4-219ENST00000487747 LRRC4Q9HBW1 653 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 TMLHEQ9NVH6 421 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 OR6C3Q9NZP0 311 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 FBXO40Q9UH90 709 aa4.34□□□□□ -1.71
SMC4-219ENST00000487747 KDM4BO94953 1096 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 METTL18O95568 372 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 PMS2P2O95744 297 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 IGHV4-30-4P0DP06 118 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 DGKAP23743 735 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 ST3GAL1Q11201 340 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 NCAPH2Q6IBW4 605 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 CCDC129Q6ZRS4 1044 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 LMNTD1Q8N9Z9 388 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 KBTBD3Q8NAB2 608 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 EPYCQ99645 322 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 EVA1AQ9H8M9 152 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 G6PC2Q9NQR9 355 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 LRCH1Q9Y2L9 728 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 PCDHAC2Q9Y5I4 1007 aa4.33□□□□□ -1.72
SMC4-219ENST00000487747 hDV102S1A0JD36 115 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 PRC1O43663 620 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 KIF1CO43896 1103 aaKnown RBP4.32□□□□□ -1.72
SMC4-219ENST00000487747 CLDN14O95500 239 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 CFC1P0CG37 223 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 CXCR3P49682 368 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 ZNF132P52740 706 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 RBM5P52756 815 aaKnown RBP eCLIP4.32□□□□□ -1.72
SMC4-219ENST00000487747 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
SMC4-219ENST00000487747 TBX4P57082 545 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 MAP9Q49MG5 647 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 TANGO2Q6ICL3 276 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 TUBA1AQ71U36 451 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 MARK2Q7KZI7 788 aaKnown RBP4.32□□□□□ -1.72
SMC4-219ENST00000487747 CCDC105Q8IYK2 499 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 CIARTQ8N365 385 aaPredicted RBP4.32□□□□□ -1.72
SMC4-219ENST00000487747 IL17RCQ8NAC3 791 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 SECTM1Q8WVN6 248 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 TUBA1CQ9BQE3 449 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 NOX4Q9NPH5 578 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 SLC9A2Q9UBY0 812 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 SRP68Q9UHB9 627 aaKnown RBP4.32□□□□□ -1.72
SMC4-219ENST00000487747 CLDN16Q9Y5I7 305 aa4.32□□□□□ -1.72
SMC4-219ENST00000487747 IGHV4OR15-8A0A075B7B6 117 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 HNRNPCL2B2RXH8 293 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 ADAP00813 363 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 SETSIPP0DME0 302 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 TTKP33981 857 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 PIGAP37287 484 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 NLRP5P59047 1200 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 CEP85LQ5SZL2 805 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 GJB7Q6PEY0 223 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 UNQ6126/PRO20091Q6UXV3 157 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 RINLQ6ZS11 566 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 DENND6AQ8IWF6 608 aa4.31□□□□□ -1.72
SMC4-219ENST00000487747 CACNA2D3Q8IZS8 1091 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms