RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 CDH18Q13634 790 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 DBN1Q16643 649 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 C9orf50Q5SZB4 431 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 CNTN4Q8IWV2 1026 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 UNC5BQ8IZJ1 945 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 SRPK1Q96SB4 655 aaKnown RBP20.6■□□□□ 0.89
PHF1-209ENST00000487667 FAM167BQ9BTA0 163 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 RABEP2Q9H5N1 569 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 MLXIPLQ9NP71 852 aa20.6■□□□□ 0.89
PHF1-209ENST00000487667 E2F8A0AVK6 867 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 CCL16O15467 120 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 CYBBP04839 570 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 INSCQ1MX18 579 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 HSP90AA5PQ58FG0 334 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 PIGWQ7Z7B1 504 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 STRA8Q7Z7C7 330 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 LMNTD2Q8IXW0 634 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 CARNMT1Q8N4J0 409 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 ZNF557Q8N988 423 aaPredicted RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 WBP2Q969T9 261 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 ISL2Q96A47 359 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 TREX1Q9NSU2 369 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 CFAP97Q9P2B7 532 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 DCDC2Q9UHG0 476 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 CBX4O00257 560 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 SIN3BO75182 1162 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 DHRS4L1P0CG22 281 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 SGSHP51688 502 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 NSUN2Q08J23 767 aaKnown RBP eCLIP20.59■□□□□ 0.89
PHF1-209ENST00000487667 THOC5Q13769 683 aaKnown RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 BMPR2Q13873 1038 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 KYAT3Q6YP21 454 aaKnown RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 KIAA0408Q6ZU52 694 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 NDUFAF2Q8N183 169 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 DCAF4L2Q8NA75 395 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 TDRD5Q8NAT2 981 aaKnown RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 CCDC197Q8NCU1 140 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 SEC16BQ96JE7 1060 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 KLF6Q99612 283 aaPredicted RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 C17orf80Q9BSJ5 609 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 C2orf49Q9BVC5 232 aaPredicted RBP20.59■□□□□ 0.89
PHF1-209ENST00000487667 TASP1Q9H6P5 420 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 MAN1C1Q9NR34 630 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 ZDHHC7Q9NXF8 308 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 RIMKLBQ9ULI2 386 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 GRID1Q9ULK0 1009 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 PLLPQ9Y342 182 aa20.59■□□□□ 0.89
PHF1-209ENST00000487667 HMX2A2RU54 273 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 GLRA3O75311 464 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 TAC1P20366 129 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 AVPR1AP37288 418 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 SERPINB8P50452 374 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 ITIH4Q14624 930 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 SLC25A41Q8N5S1 370 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 ACDQ96AP0 544 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 FEM1AQ9BSK4 669 aa20.58■□□□□ 0.88
PHF1-209ENST00000487667 INSIG1O15503 277 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 KIAA0754O94854 1291 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 NDST3O95803 873 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 MPOP05164 745 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 DNAJB1P25685 340 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 ETV4P43268 484 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SLC12A1Q13621 1099 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SHHQ15465 462 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 RETSATQ6NUM9 610 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 LCA5Q86VQ0 697 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 MFN1Q8IWA4 741 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 OR52K2Q8NGK3 314 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 DDI1Q8WTU0 396 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SLC22A17Q8WUG5 538 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 USP13Q92995 863 aaPredicted RBP20.57■□□□□ 0.88
PHF1-209ENST00000487667 NUDCD1Q96RS6 583 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SLC46A2Q9BY10 475 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 PITPNM3Q9BZ71 974 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 IARS2Q9NSE4 1012 aaKnown RBP20.57■□□□□ 0.88
PHF1-209ENST00000487667 VPS28Q9UK41 221 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 MIA3Q5JRA6 1907 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 LEFTY2O00292 366 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 ZNF197O14709 1029 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 GSTA1P08263 222 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 TYK2P29597 1187 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SEPT6Q14141 434 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SIRPB2Q5JXA9 342 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 TSTD2Q5T7W7 516 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 GPR158Q5T848 1215 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 FYB2Q5VWT5 728 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 CMTM8Q8IZV2 173 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 RAB3IL1Q8TBN0 382 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SPOCK2Q92563 424 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 RHOJQ9H4E5 214 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 SCUBE2Q9NQ36 999 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 KIAA1522Q9P206 1035 aaPredicted RBP20.57■□□□□ 0.88
PHF1-209ENST00000487667 PSAT1Q9Y617 370 aa20.57■□□□□ 0.88
PHF1-209ENST00000487667 GRXCR1A8MXD5 290 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 CR2P20023 1033 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 RNF43Q68DV7 783 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 GALNT7Q86SF2 657 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 SHKBP1Q8TBC3 707 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 PTPRN2Q92932 1015 aa20.56■□□□□ 0.88
PHF1-209ENST00000487667 FAM111AQ96PZ2 611 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms