RNA–Protein interactions for RNA: ENST00000487625.1

USP9X-208, Transcript of ubiquitin specific peptidase 9 X-linked, humanhuman

TSL 2

Gene USP9X, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP9X-208ENST00000487625 SCAIQ8N9R8 606 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 FAM71BQ8TC56 605 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 RSC1A1Q92681 617 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 ARRDC3Q96B67 414 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 BICD1Q96G01 975 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 CCDC136Q96JN2 1154 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 CCDC138Q96M89 665 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 MSTO1Q9BUK6 570 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 NPFFR1Q9GZQ6 430 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 PRO0461Q9UI25 63 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 DAPP1Q9UN19 280 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 SLC45A1Q9Y2W3 748 aa2.28□□□□□ -2.04
USP9X-208ENST00000487625 A0A1B0GVM2 712 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 ANO9A1A5B4 782 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 TARSL2A2RTX5 802 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 TMEM247A6NEH6 219 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 IFRD1O00458 451 aaPredicted RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 SYN3O14994 580 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 DCTDP32321 178 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 CDK7P50613 346 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 SETQ01105 290 aaPredicted RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 HDAC1Q13547 482 aaPredicted RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 DHX34Q14147 1143 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 SPARCL1Q14515 664 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 TBRG1Q3YBR2 411 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 LRRC24Q50LG9 513 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 XKR9Q5GH70 373 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 TTC22Q5TAA0 569 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 TYW3Q6IPR3 259 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 NFRKBQ6P4R8 1299 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 GALNT7Q86SF2 657 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 PATL1Q86TB9 770 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 SYTL1Q8IYJ3 562 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 RBFAQ8N0V3 343 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 RFWD2Q8NHY2 731 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 SCAMP5Q8TAC9 235 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 SORCS1Q8WY21 1168 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 TEFMQ96QE5 360 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 PIGSQ96S52 555 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 RTKNQ9BST9 563 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 RBM4Q9BWF3 364 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 CADM1Q9BY67 442 aaKnown RBP2.27□□□□□ -2.05
USP9X-208ENST00000487625 CLPBQ9H078 707 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 CXorf56Q9H5V9 222 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 ARNT2Q9HBZ2 717 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 KLQ9UEF7 1012 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 PHTF1Q9UMS5 762 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 COMMD10Q9Y6G5 202 aa2.27□□□□□ -2.05
USP9X-208ENST00000487625 MAGEA13PA6NCF6 341 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 LGALS16A8MUM7 142 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 EFCAB8A8MWE9 144 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 J3KR12 359 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 CLGNO14967 610 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 FGF5P12034 268 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 ACP5P13686 325 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 PNLIPRP1P54315 467 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 ADORA2A-AS1P86434 159 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 CYP4A11Q02928 519 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 DCTN1Q14203 1278 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 KRT72Q14CN4 511 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 TMEM268Q5VZI3 342 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 DGAT2L7PQ6IED9 249 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 LIN54Q6MZP7 749 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 SYNE3Q6ZMZ3 975 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 TRMT1LQ7Z2T5 733 aaKnown RBP2.26□□□□□ -2.05
USP9X-208ENST00000487625 BRSK2Q8IWQ3 736 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 SVIPQ8NHG7 77 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 DEPTORQ8TB45 409 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 NEK9Q8TD19 979 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 SECTM1Q8WVN6 248 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 ATOH1Q92858 354 aaPredicted RBP2.26□□□□□ -2.05
USP9X-208ENST00000487625 SGCZQ96LD1 299 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 KATNAL1Q9BW62 490 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 BRD8Q9H0E9 1235 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 ELAC1Q9H777 363 aaKnown RBP2.26□□□□□ -2.05
USP9X-208ENST00000487625 OBP2BQ9NPH6 170 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 PRDM8Q9NQV8 689 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 ZNF69Q9UC07 566 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 CDC23Q9UJX2 597 aa2.26□□□□□ -2.05
USP9X-208ENST00000487625 KRTAP16-1A8MUX0 517 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 ACTL6BO94805 426 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 CH25HO95992 272 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 CENPBP07199 599 aaPredicted RBP2.25□□□□□ -2.05
USP9X-208ENST00000487625 CYP4B1P13584 511 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 ARSAP15289 507 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 CHN1P15882 459 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 DGKAP23743 735 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 PAX3P23760 479 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 SSTR2P30874 369 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 FMO4P31512 558 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 RPL3P39023 403 aaKnown RBP2.25□□□□□ -2.05
USP9X-208ENST00000487625 NR0B1P51843 470 aaKnown RBP2.25□□□□□ -2.05
USP9X-208ENST00000487625 AK2P54819 239 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 PHEXP78562 749 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 MORC3Q14149 939 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 PTK2BQ14289 1009 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 DHX8Q14562 1220 aaKnown RBP2.25□□□□□ -2.05
USP9X-208ENST00000487625 STARD3Q14849 445 aa2.25□□□□□ -2.05
USP9X-208ENST00000487625 ATPAF1Q5TC12 328 aaPredicted RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms