RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 FURINP09958 794 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 IDEP14735 1019 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 PDGFRAP16234 1089 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 VARSP26640 1264 aaKnown RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 TSPAN7P41732 249 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 NUMBP49757 651 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 BLKP51451 505 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 THOP1P52888 689 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 TRA2AQ13595 282 aaKnown RBP eCLIP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 HLTFQ14527 1009 aaKnown RBP eCLIP11.88□□□□□ -0.514e-6■■■□□ 16.5
TRIM56-204ENST00000487252 ZACNQ401N2 412 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 PAPD7Q5XG87 772 aaKnown RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 CXorf57Q6NSI4 855 aaKnown RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 C16orf46Q6P387 395 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 EPM2AIP1Q7L775 607 aaPredicted RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 APLFQ8IW19 511 aaPredicted RBP11.88□□□□□ -0.51
TRIM56-204ENST00000487252 BMPERQ8N8U9 685 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 Q8NA96 180 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 CCDC112Q8NEF3 446 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 RASSF8Q8NHQ8 419 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 SLC39A13Q96H72 371 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 NUP62CLQ9H1M0 184 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 PANK4Q9NVE7 773 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 ITGB1BP2Q9UKP3 347 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 HS3ST2Q9Y278 367 aa11.88□□□□□ -0.51
TRIM56-204ENST00000487252 TOR1BO14657 336 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 ADRB3P13945 408 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 CYP2J2P51589 502 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 TBX4P57082 545 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 SNRPFP62306 86 aaKnown RBP11.87□□□□□ -0.51
TRIM56-204ENST00000487252 NR1D2Q14995 579 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 MAP9Q49MG5 647 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 DCAF12Q5T6F0 453 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 SV2BQ7L1I2 683 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 ZNF438Q7Z4V0 828 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 BRAPQ7Z569 592 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 GKN2Q86XP6 184 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 ANKRD52Q8NB46 1076 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 AGBL5Q8NDL9 886 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 ZNF507Q8TCN5 953 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 CCDC74BQ96LY2 380 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 TEFMQ96QE5 360 aaKnown RBP11.87□□□□□ -0.51
TRIM56-204ENST00000487252 DYRK4Q9NR20 520 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 SLC39A1Q9NY26 324 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 LRIT1Q9P2V4 623 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 POLHQ9Y253 713 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 TMEM184BQ9Y519 407 aaPredicted RBP11.87□□□□□ -0.51
TRIM56-204ENST00000487252 OR51B4Q9Y5P0 310 aa11.87□□□□□ -0.51
TRIM56-204ENST00000487252 GOLGA6L4A6NEF3 574 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 IGLON5A6NGN9 336 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 CLIC2O15247 247 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 F8A1P23610 371 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 IGFALSP35858 605 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 EIF4A3P38919 411 aaKnown RBP11.86□□□□□ -0.51
TRIM56-204ENST00000487252 NEK3P51956 506 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 LIMK2P53671 638 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 RAB15P59190 212 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 SGCGQ13326 291 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 ALG11Q2TAA5 492 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 C14orf28Q4W4Y0 310 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 CEP135Q66GS9 1140 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 ARHGAP17Q68EM7 881 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 STXBP4Q6ZWJ1 553 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 SFTPA2Q8IWL1 248 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 C12orf56Q8IXR9 622 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 CCAR2Q8N163 923 aaKnown RBP11.86□□□□□ -0.51
TRIM56-204ENST00000487252 EPSTI1Q96J88 318 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 USP28Q96RU2 1077 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 NUDT22Q9BRQ3 303 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 FEM1AQ9BSK4 669 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 APOBEC3GQ9HC16 384 aaKnown RBP11.86□□□□□ -0.51
TRIM56-204ENST00000487252 XPO7Q9UIA9 1087 aaKnown RBP11.86□□□□□ -0.51
TRIM56-204ENST00000487252 SLC25A13Q9UJS0 675 aa11.86□□□□□ -0.51
TRIM56-204ENST00000487252 MRPS18BQ9Y676 258 aaKnown RBP11.86□□□□□ -0.51
TRIM56-204ENST00000487252 ARHGEF17Q96PE2 2063 aaPredicted RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 XPO1O14980 1071 aaKnown RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 BNIP3LO60238 219 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 CLSTN1O94985 981 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 YEATS4O95619 227 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 MT-CO1P00395 513 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 SRCP12931 536 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 ITGA3P26006 1051 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 STAT5AP42229 794 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 DAOAP59103 153 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 ADIGQ0VDE8 80 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 NNTQ13423 1086 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 SQSTM1Q13501 440 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 NR6A1Q15406 480 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 EDRF1Q3B7T1 1238 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 ARSIQ5FYB1 569 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 ANKS6Q68DC2 871 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 JMJD6Q6NYC1 403 aaPredicted RBP11.85□□□□□ -0.51
TRIM56-204ENST00000487252 GDF7Q7Z4P5 450 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 LGI2Q8N0V4 545 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 CHST14Q8NCH0 376 aa11.85□□□□□ -0.51
TRIM56-204ENST00000487252 OR52K2Q8NGK3 314 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms