RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 MID1O15344 667 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 STIP1P31948 543 aaKnown RBP19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 GKP32189 559 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 CNR2P34972 360 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 PSMD8P48556 350 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 TPMTP51580 245 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 MAXP61244 160 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 MAP7D1Q3KQU3 841 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 USP39Q53GS9 565 aaKnown RBP19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 GDPD4Q6W3E5 623 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 ZSCAN30Q86W11 494 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 OR6K2Q8NGY2 324 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 ARRDC2Q8TBH0 407 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 GRIN3AQ8TCU5 1115 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 C1orf54Q8WWF1 131 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 PPP1R16AQ96I34 528 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 C16orf45Q96MC5 204 aaPredicted RBP19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 ZNF641Q96N77 438 aaPredicted RBP19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 SEMA3CQ99985 751 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 IRF2BPLQ9H1B7 796 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 SUV39H2Q9H5I1 410 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 TRHDEQ9UKU6 1024 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 DRG1Q9Y295 367 aaKnown RBP19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 PCDHGA2Q9Y5H1 932 aa19.61■□□□□ 0.73
PCOLCE-208ENST00000487172 RNF103O00237 685 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 KPNA3O00505 521 aaPredicted RBP19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 KCNN4O15554 427 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ITGAVP06756 1048 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ITGB7P26010 798 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 OXTRP30559 389 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 P2RY2P41231 377 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ITKQ08881 620 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 CCDC15Q0P6D6 951 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ZNF805Q5CZA5 627 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 CREG2Q8IUH2 290 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ZNF567Q8N184 647 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 AADATQ8N5Z0 425 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 PRELID2Q8N945 189 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ATG4AQ8WYN0 398 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 NSMCE3Q96MG7 304 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 AGAP3Q96P47 875 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 ATP13A3Q9H7F0 1226 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 C10orf88Q9H8K7 445 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 NOD2Q9HC29 1040 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 FBXL12Q9NXK8 326 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 DKK3Q9UBP4 350 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 FZD4Q9ULV1 537 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 NCKAP1Q9Y2A7 1128 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 EML5Q05BV3 1969 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 PLXND1Q9Y4D7 1925 aa19.6■□□□□ 0.73
PCOLCE-208ENST00000487172 A0A1W2PQ67 120 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 C5orf60A6NFR6 353 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 TRAFD1O14545 582 aaPredicted RBP19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 SLC7A4O43246 635 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 LILRB5O75023 590 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 STK10O94804 968 aaKnown RBP19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 UGT2B4P06133 528 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 SERPINA4P29622 427 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 CD68P34810 354 aaPredicted RBP19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 DRD3P35462 400 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 BCL2L1Q07817 233 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 TCF15Q12870 199 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 SLC14A2Q15849 920 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 CYP1B1Q16678 543 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 PID1Q7Z2X4 250 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 HDDC3Q8N4P3 179 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 PRSS33Q8NF86 280 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 SPOCK2Q92563 424 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 ARRDC3Q96B67 414 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 ECHDC3Q96DC8 303 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 RTP4Q96DX8 246 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 KLHL32Q96NJ5 620 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 OMDQ99983 421 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 HDAC8Q9BY41 377 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 CEP41Q9BYV8 373 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 SLC25A51Q9H1U9 297 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 GLOD4Q9HC38 313 aa19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 KLHL8Q9P2G9 620 aaPredicted RBP19.59■□□□□ 0.73
PCOLCE-208ENST00000487172 IGHV1OR15-9A0A0B4J2B8 117 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 A0A1W2PP55 124 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 TSPAN11A1L157 253 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 TTC24A2A3L6 582 aaPredicted RBP19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 HTRA2O43464 458 aaPredicted RBP19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 SOCS5O75159 536 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 GCATO75600 419 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 GJB3O75712 270 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 METAP1P53582 386 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 DSC2Q02487 901 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 NIPAL4Q0D2K0 466 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 ANKRD20A2Q5SQ80 823 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 ANKRD20A1Q5TYW2 823 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 ANKRD20A3Q5VUR7 823 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 C11orf74Q86VG3 221 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 CACUL1Q86Y37 369 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 CAMK1DQ8IU85 385 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 C12orf50Q8NA57 414 aaPredicted RBP19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 GAB3Q8WWW8 586 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 TADA1Q96BN2 335 aa19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 IMP4Q96G21 291 aaKnown RBP19.58■□□□□ 0.72
PCOLCE-208ENST00000487172 SPACA7Q96KW9 195 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms