RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SERPINF2P08697 491 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CTSAP10619 480 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 CD151P48509 253 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 RASSF2P50749 326 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CLCN5P51795 746 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 KPNA2P52292 529 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 HK2P52789 917 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 DEFB103AP81534 67 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 HTRA4P83105 476 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 POU4F1Q01851 419 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 DSC2Q02487 901 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 STX3Q13277 289 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 THOC5Q13769 683 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 TAF12Q16514 161 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 LRRC26Q2I0M4 334 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 FASTKD1Q53R41 847 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 ASRGL1Q7L266 308 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 DNAJB7Q7Z6W7 309 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 CRLF3Q8IUI8 442 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 PGBD5Q8N414 524 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 SKA1Q96BD8 255 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ERP27Q96DN0 273 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZFRQ96KR1 1074 aaKnown RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZNF778Q96MU6 729 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 WWP1Q9H0M0 922 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 MFSD1Q9H3U5 465 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 SORCS3Q9UPU3 1222 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 PCDHB12Q9Y5F1 795 aa12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
PKP4-213ENST00000486254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 TMEM114B3SHH9 223 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 PRRG1O14668 218 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 VAPBO95292 243 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 NDST3O95803 873 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 KLKB1P03952 638 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 FGF3P11487 239 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 MYL4P12829 197 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 ALOX15P16050 662 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 CR2P20023 1033 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 ACVRL1P37023 503 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 SLC26A3P40879 764 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 LEPRP48357 1165 aaKnown RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 ARFIP2P53365 341 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 ZNF177Q13360 481 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 SLC12A1Q13621 1099 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 TBCCQ15814 346 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 NEPROQ6NW34 567 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 ESRP1Q6NXG1 681 aaKnown RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 Q6ZNB5 142 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 TMEM150AQ86TG1 271 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.08□□□□□ -0.48
PKP4-213ENST00000486254 HJURPQ8NCD3 748 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 GPR150Q8NGU9 434 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 MYEOVQ96EZ4 313 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 KLHL5Q96PQ7 755 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 TMEM237Q96Q45 408 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 SEMA3CQ99985 751 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 C19orf43Q9BQ61 176 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 MYLK2Q9H1R3 596 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 LRMDAQ9H2I8 198 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 KCNK13Q9HB14 408 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 IL23AQ9NPF7 189 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 ARHGEF3Q9NR81 526 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 UBA2Q9UBT2 640 aaPredicted RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 FBXO5Q9UKT4 447 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 AGO1Q9UL18 857 aaKnown RBP12.08□□□□□ -0.48
PKP4-213ENST00000486254 ZNF510Q9Y2H8 683 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 IRAK3Q9Y616 596 aa12.08□□□□□ -0.48
PKP4-213ENST00000486254 KIAA0100Q14667 2235 aaKnown RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 A0A087X1B8 175 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TYW5A2RUC4 315 aaKnown RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 TRIM43BA6NCK2 446 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 MYCP01106 439 aaPredicted RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 AHSGP02765 367 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 RHOCP08134 193 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CPA3P15088 417 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CSF2RAP15509 400 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 RAG1P15918 1043 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 GABRB3P28472 473 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 SLC1A2P43004 574 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 OXCT1P55809 520 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 RAB10P61026 200 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 TWF1Q12792 350 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 RIPK1Q13546 671 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 GRM3Q14832 879 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 KRT72Q14CN4 511 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CNGA3Q16281 694 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 INO80DQ53TQ3 878 aaPredicted RBP12.07□□□□□ -0.48
PKP4-213ENST00000486254 SIRPB2Q5JXA9 342 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 MPP7Q5T2T1 576 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CCDC149Q6ZUS6 474 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 NECAB2Q7Z6G3 386 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CLNKQ7Z7G1 428 aa12.07□□□□□ -0.48
PKP4-213ENST00000486254 CIR1Q86X95 450 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms