RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 KDM4CQ9H3R0 1056 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 ACP6Q9NPH0 428 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 RRAGDQ9NQL2 400 aaPredicted RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 TMPRSS4Q9NRS4 437 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 GPR27Q9NS67 375 aa10.05□□□□□ -0.8
SND1-213ENST00000486037 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 PNMA8BQ9ULN7 279 aaPredicted RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 ZFR2Q9UPR6 939 aaKnown RBP10.05□□□□□ -0.8
SND1-213ENST00000486037 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 A0A087X0T9 212 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 NEMP2A6NFY4 417 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 C9orf172C9J069 976 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 AKR1B10O60218 316 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SEMA7AO75326 666 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 AGFG2O95081 481 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 CALCAP01258 141 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SRPRAP08240 638 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 FAM228BP0C875 321 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 KRT5P13647 590 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 CHRNB2P17787 502 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 TBXAS1P24557 533 aaPredicted RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 NUDT1P36639 197 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 DCTP40126 519 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 USP8P40818 1118 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 MLLT10P55197 1068 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SPIDRQ14159 915 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 ELAVL3Q14576 367 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 RAB41Q5JT25 222 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SEL1L3Q68CR1 1132 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 BORAQ6PGQ7 559 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 Q6ZSR6 202 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 ABI3BPQ7Z7G0 1075 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 UNC93AQ86WB7 457 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 TICAM1Q8IUC6 712 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SRRM1Q8IYB3 904 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 RBFAQ8N0V3 343 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 CARNMT1Q8N4J0 409 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 KDM1BQ8NB78 822 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 TPCN2Q8NHX9 752 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 FRS2Q8WU20 508 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 SLC20A1Q8WUM9 679 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 PHF12Q96QT6 1004 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 BOCQ9BWV1 1114 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 ULBP1Q9BZM6 244 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 PREBQ9HCU5 417 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 NENFQ9UMX5 172 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 CNTN6Q9UQ52 1028 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
SND1-213ENST00000486037 SDK2Q58EX2 2172 aa10.04□□□□□ -0.8
SND1-213ENST00000486037 F8P00451 2351 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 A0A1W2PQM1 296 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 RCCD1A6NED2 376 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 POM121BA6NF01 834 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 DDX3XO00571 662 aaKnown RBP eCLIP10.03□□□□□ -0.8
SND1-213ENST00000486037 RAD51BO15315 384 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 NVLO15381 856 aaKnown RBP10.03□□□□□ -0.8
SND1-213ENST00000486037 SLC7A4O43246 635 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 SPINT1O43278 529 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 AQP9O43315 295 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 GCATO75600 419 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 CSF2P04141 144 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 KRT7P08729 469 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 CCDC175P0C221 793 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 NME1P15531 152 aaKnown RBP10.03□□□□□ -0.8
SND1-213ENST00000486037 CD58P19256 250 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 HNRNPKP61978 463 aaKnown RBP eCLIP10.03□□□□□ -0.83e-6■■□□□ 14.5
SND1-213ENST00000486037 ECT2LQ008S8 904 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 INCA1Q0VD86 236 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 C1orf61Q13536 156 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 FGL2Q14314 439 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 MPP7Q5T2T1 576 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 PIP5KL1Q5T9C9 394 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 PTAR1Q7Z6K3 402 aaPredicted RBP10.03□□□□□ -0.8
SND1-213ENST00000486037 PIGZQ86VD9 579 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 SLC47A2Q86VL8 602 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 CFAP52Q8N1V2 620 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 ZSCAN1Q8NBB4 408 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 SLC30A5Q8TAD4 765 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 LMX1AQ8TE12 382 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 EPS8L1Q8TE68 723 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 IFT43Q96FT9 208 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 FAXDC2Q96IV6 333 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 AGPAT1Q99943 283 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 DEF6Q9H4E7 631 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 CISHQ9NSE2 258 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 EVA1BQ9NVM1 165 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 SEPT10Q9P0V9 454 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 SALL4Q9UJQ4 1053 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 TFR2Q9UP52 801 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 HBS1LQ9Y450 684 aaKnown RBP10.03□□□□□ -0.8
SND1-213ENST00000486037 LOXL2Q9Y4K0 774 aa10.03□□□□□ -0.8
SND1-213ENST00000486037 D6RAR5 112 aa10.02□□□□□ -0.81
SND1-213ENST00000486037 ZSCAN12O43309 604 aa10.02□□□□□ -0.81
SND1-213ENST00000486037 LATS1O95835 1130 aa10.02□□□□□ -0.81
SND1-213ENST00000486037 IGLV3-27P01718 113 aa10.02□□□□□ -0.81
SND1-213ENST00000486037 CTSLP07711 333 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms