RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ASIC3Q9UHC3 531 aa17.79■□□□□ 0.44
CHMP3-207ENST00000485465 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 A0A1W2PQF6 199 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 TMEM221A6NGB7 291 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 M0R296 226 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ALOX15BO15296 676 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ATG13O75143 517 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ANXA9O76027 345 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 MT-CYBP00156 380 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 PDGFBP01127 241 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 SERPINF2P08697 491 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 GKP32189 559 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ADCY8P40145 1251 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 RPS9P46781 194 aaKnown RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 GAS6Q14393 721 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ELAVL3Q14576 367 aaKnown RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 STARD3Q14849 445 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 SLC14A2Q15849 920 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 KIAA1211LQ6NV74 962 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 KLHDC8BQ8IXV7 354 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 OR8D1Q8WZ84 308 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 VOPP1Q96AW1 172 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 LRRC45Q96CN5 670 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 TUBGCP5Q96RT8 1024 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 FAM129BQ96TA1 746 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ERP44Q9BS26 406 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 MLPHQ9BV36 600 aaPredicted RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 ZDHHC6Q9H6R6 413 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 UBP1Q9NZI7 540 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 IL36AQ9UHA7 158 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 FAM153AQ9UHL3 310 aa17.78■□□□□ 0.44
CHMP3-207ENST00000485465 AAR2Q9Y312 384 aaKnown RBP17.78■□□□□ 0.44
CHMP3-207ENST00000485465 CTSLP07711 333 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 COL9A1P20849 921 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 IVDP26440 423 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 GEMP55040 296 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 SLC7A5Q01650 507 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 MPP3Q13368 585 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 SEMA5AQ13591 1074 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 GRM3Q14832 879 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 ARSIQ5FYB1 569 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 CWF19L1Q69YN2 538 aaKnown RBP17.77■□□□□ 0.44
CHMP3-207ENST00000485465 ERLEC1Q96DZ1 483 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 LRIG1Q96JA1 1093 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 RAB17Q9H0T7 212 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 CHRDQ9H2X0 955 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 ATP13A3Q9H7F0 1226 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 CD248Q9HCU0 757 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 VPS45Q9NRW7 570 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 UTP11Q9Y3A2 253 aaKnown RBP17.77■□□□□ 0.44
CHMP3-207ENST00000485465 WASF2Q9Y6W5 498 aa17.77■□□□□ 0.44
CHMP3-207ENST00000485465 GOLGA6CA6NDK9 693 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 GOLGA6BA6NDN3 693 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 EFCAB8A8MWE9 144 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PSMD3O43242 534 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PMPCBO75439 489 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 LEFTY1O75610 366 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PIGNO95427 931 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PRNPP04156 253 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 DCNP07585 359 aaKnown RBP17.76■□□□□ 0.43
CHMP3-207ENST00000485465 GOLGA6DP0CG33 693 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 BASP1P80723 227 aaKnown RBP17.76■□□□□ 0.43
CHMP3-207ENST00000485465 BCL2L1Q07817 233 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 DUPD1Q68J44 220 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 CCDC70Q6NSX1 233 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 KDELC1Q6UW63 502 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 TMEM92Q6UXU6 159 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 GDPD4Q6W3E5 623 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 SYT13Q7L8C5 426 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 DSG4Q86SJ6 1040 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 CAMK1DQ8IU85 385 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 TMIEQ8NEW7 156 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 OR2T3Q8NH03 318 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 GRIN3AQ8TCU5 1115 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 OSBPL1AQ9BXW6 950 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 TRIM31Q9BZY9 425 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 RSPH9Q9H1X1 276 aaPredicted RBP17.76■□□□□ 0.43
CHMP3-207ENST00000485465 FBRSQ9HAH7 460 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 POLR3BQ9NW08 1133 aaPredicted RBP17.76■□□□□ 0.43
CHMP3-207ENST00000485465 GOLGA6AQ9NYA3 693 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PPM1HQ9ULR3 514 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 PCDHGC4Q9Y5F7 938 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 RAI2Q9Y5P3 530 aa17.76■□□□□ 0.43
CHMP3-207ENST00000485465 E7EVH7 732 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 DNALI1O14645 258 aaPredicted RBP17.75■□□□□ 0.43
CHMP3-207ENST00000485465 RNASEH1O60930 286 aaKnown RBP17.75■□□□□ 0.43
CHMP3-207ENST00000485465 SOCS5O75159 536 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 HEXIM1O94992 359 aaKnown RBP17.75■□□□□ 0.43
CHMP3-207ENST00000485465 SERPINA4P29622 427 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 MAGEA9P43362 315 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 LMAN1P49257 510 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 COPAP53621 1224 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 TERF1P54274 439 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 WNT3AP56704 352 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 TUBB4BP68371 445 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 TRAF2Q12933 501 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 CRY1Q16526 586 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 TEX35Q5T0J7 233 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 KCTD11Q693B1 232 aa17.75■□□□□ 0.43
CHMP3-207ENST00000485465 MMAAQ8IVH4 418 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms