RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 VCPIP1Q96JH7 1222 aa28.81■■■□□ 2.2
HLA-C-207ENST00000484378 KLHL32Q96NJ5 620 aa28.81■■■□□ 2.2
HLA-C-207ENST00000484378 SYT11Q9BT88 431 aa28.81■■■□□ 2.2
HLA-C-207ENST00000484378 KLC2Q9H0B6 622 aa28.81■■■□□ 2.2
HLA-C-207ENST00000484378 GGT7Q9UJ14 662 aa28.81■■■□□ 2.2
HLA-C-207ENST00000484378 POM121BA6NF01 834 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 IGLON5A6NGN9 336 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 LRRC53A6NM62 1247 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 SMTNL1A8MU46 457 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 RAD51BO15315 384 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 FGF10O15520 208 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-207ENST00000484378 PIAS2O75928 621 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 RHOAP61586 193 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 RAD51Q06609 339 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 ZNF211Q13398 564 aaPredicted RBP28.8■■■□□ 2.2
HLA-C-207ENST00000484378 ASIC2Q16515 512 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 GDPD4Q6W3E5 623 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 OR4C6Q8NH72 309 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 IFT43Q96FT9 208 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 BMFQ96LC9 184 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 TTYH3Q9C0H2 523 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 PARVAQ9NVD7 372 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 DNAJC28Q9NX36 388 aa28.8■■■□□ 2.2
HLA-C-207ENST00000484378 WASH4PA8MWX3 477 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 FPGTO14772 594 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 ATMINO43313 823 aaPredicted RBP28.79■■■□□ 2.2
HLA-C-207ENST00000484378 PSMA2P25787 234 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 RABIFP47224 123 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 TPI1P60174 286 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 DAB2P98082 770 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 SERINC3Q13530 473 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 INO80DQ53TQ3 878 aaPredicted RBP28.79■■■□□ 2.2
HLA-C-207ENST00000484378 NETO2Q8NC67 525 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 C1QTNF2Q9BXJ5 285 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 GPR27Q9NS67 375 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 GPSM3Q9Y4H4 160 aa28.79■■■□□ 2.2
HLA-C-207ENST00000484378 ALPPL2P10696 532 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 ACP1P24666 158 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 HTR7P34969 479 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 MAMLD1Q13495 774 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 ZNF542PQ5EBM4 170 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 CAVIN1Q6NZI2 390 aaKnown RBP28.78■■■□□ 2.2
HLA-C-207ENST00000484378 UMODL1-AS1Q8N2C9 162 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 VOPP1Q96AW1 172 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 NXPE2Q96DL1 559 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 LENG8Q96PV6 779 aaPredicted RBP28.78■■■□□ 2.2
HLA-C-207ENST00000484378 GPATCH2LQ9NWQ4 482 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 AP4E1Q9UPM8 1137 aa28.78■■■□□ 2.2
HLA-C-207ENST00000484378 SPINT1O43278 529 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 HNRNPKP61978 463 aaKnown RBP eCLIP28.77■■■□□ 2.2
HLA-C-207ENST00000484378 LRRC73Q5JTD7 316 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 TTC7BQ86TV6 843 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 DENND6BQ8NEG7 585 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 KLF6Q99612 283 aaPredicted RBP28.77■■■□□ 2.2
HLA-C-207ENST00000484378 CAAP1Q9H8G2 361 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 DONSONQ9NYP3 566 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 IPO11Q9UI26 975 aaKnown RBP28.77■■■□□ 2.2
HLA-C-207ENST00000484378 TDRD6O60522 2096 aaKnown RBP28.77■■■□□ 2.2
HLA-C-207ENST00000484378 KNTC1P50748 2209 aa28.77■■■□□ 2.2
HLA-C-207ENST00000484378 ZNF165P49910 485 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 TARDBPQ13148 414 aaKnown RBP eCLIP28.76■■■□□ 2.19
HLA-C-207ENST00000484378 FZD2Q14332 565 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 PLEKHA7Q6IQ23 1121 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 C19orf48Q6RUI8 117 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 PARGQ86W56 976 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 ASB12Q8WXK4 309 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 EXOC2Q96KP1 924 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 NCAPGQ9BPX3 1015 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 DHX35Q9H5Z1 703 aaKnown RBP28.76■■■□□ 2.19
HLA-C-207ENST00000484378 HAUS4Q9H6D7 363 aa28.76■■■□□ 2.19
HLA-C-207ENST00000484378 UBA2Q9UBT2 640 aaPredicted RBP28.76■■■□□ 2.19
HLA-C-207ENST00000484378 SPTY2D1-AS1A0A0U1RR47 76 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 NEMP2A6NFY4 417 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 AREL1O15033 823 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 PDE1CQ14123 709 aaPredicted RBP28.75■■■□□ 2.19
HLA-C-207ENST00000484378 NLGN3Q9NZ94 848 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 LHX3Q9UBR4 397 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 MFHAS1Q9Y4C4 1052 aa28.75■■■□□ 2.19
HLA-C-207ENST00000484378 A0A1W2PQC6 194 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 H3BM21 787 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 NME1P15531 152 aaKnown RBP28.74■■■□□ 2.19
HLA-C-207ENST00000484378 E4F1Q66K89 784 aaPredicted RBP28.74■■■□□ 2.19
HLA-C-207ENST00000484378 ZNF571Q7Z3V5 609 aaPredicted RBP28.74■■■□□ 2.19
HLA-C-207ENST00000484378 DNAAF5Q86Y56 855 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 CXorf40AQ8TE69 158 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 LRRC19Q9H756 370 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 AIPL1Q9NZN9 384 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 DKK3Q9UBP4 350 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 PCSK1NQ9UHG2 260 aa28.74■■■□□ 2.19
HLA-C-207ENST00000484378 EIF3CLB5ME19 914 aaKnown RBP28.73■■■□□ 2.19
HLA-C-207ENST00000484378 EEF2KO00418 725 aaKnown RBP28.73■■■□□ 2.19
HLA-C-207ENST00000484378 CSF2P04141 144 aa28.73■■■□□ 2.19
HLA-C-207ENST00000484378 GIMD1P0DJR0 217 aa28.73■■■□□ 2.19
HLA-C-207ENST00000484378 XPAP23025 273 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-207ENST00000484378 NDST2P52849 883 aa28.73■■■□□ 2.19
HLA-C-207ENST00000484378 VPS36Q86VN1 386 aa28.73■■■□□ 2.19
HLA-C-207ENST00000484378 ZNF548Q8NEK5 533 aaPredicted RBP28.73■■■□□ 2.19
HLA-C-207ENST00000484378 RFFLQ8WZ73 363 aa28.73■■■□□ 2.19
HLA-C-207ENST00000484378 CELF6Q96J87 481 aaKnown RBP28.73■■■□□ 2.19
HLA-C-207ENST00000484378 EIF3CQ99613 913 aaKnown RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms