RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 UNC5BQ8IZJ1 945 aa26.54■■□□□ 1.84
SHOX2-204ENST00000483851 DYDC1Q8WWB3 177 aa26.54■■□□□ 1.84
SHOX2-204ENST00000483851 CCT6BQ92526 530 aa26.54■■□□□ 1.84
SHOX2-204ENST00000483851 TCEAL4Q96EI5 215 aa26.54■■□□□ 1.84
SHOX2-204ENST00000483851 TDP1Q9NUW8 608 aa26.54■■□□□ 1.84
SHOX2-204ENST00000483851 ARIH1Q9Y4X5 557 aaPredicted RBP26.54■■□□□ 1.84
SHOX2-204ENST00000483851 MUSKO15146 869 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 PAPSS2O95340 614 aaPredicted RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 PAMP19021 973 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 CR2P20023 1033 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 FSCBQ5H9T9 825 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 RALGPS1Q5JS13 557 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 CES3Q6UWW8 571 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 NLRP9Q7RTR0 991 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 ANKRD42Q8N9B4 389 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 FIBINQ8TAL6 211 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 MGARPQ8TDB4 240 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 ACDQ96AP0 544 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 ALG14Q96F25 216 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 MKS1Q9NXB0 559 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 VPS28Q9UK41 221 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 UGT1A9O60656 530 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 FGF1P05230 155 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 VIMP08670 466 aaKnown RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 NMBRP28336 390 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 ARF5P84085 180 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 CDK18Q07002 472 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 NSUN2Q08J23 767 aaKnown RBP eCLIP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 SLC12A1Q13621 1099 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 POU6F1Q14863 301 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 RNF187Q5TA31 235 aaPredicted RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 CCDC121Q6ZUS5 278 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 KCNMB4Q86W47 210 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 KIAA1958Q8N8K9 716 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 C2orf49Q9BVC5 232 aaPredicted RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 NSRP1Q9H0G5 558 aaKnown RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 UGT1A7Q9HAW7 530 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 UGT1A10Q9HAW8 530 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 UGT1A8Q9HAW9 530 aa26.53■■□□□ 1.84
SHOX2-204ENST00000483851 KIAA1522Q9P206 1035 aaPredicted RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 YBX2Q9Y2T7 364 aaKnown RBP26.53■■□□□ 1.84
SHOX2-204ENST00000483851 NOTCH4Q99466 2003 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 SPAG7O75391 227 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 ERVK-10P10266 1014 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 GLDCP23378 1020 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 IL9RQ01113 521 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 ACTN3Q08043 901 aaPredicted RBP26.52■■□□□ 1.84
SHOX2-204ENST00000483851 IHHQ14623 411 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 CYTH1Q15438 398 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 METTL3Q86U44 580 aaKnown RBP26.52■■□□□ 1.84
SHOX2-204ENST00000483851 ZNF557Q8N988 423 aaPredicted RBP26.52■■□□□ 1.84
SHOX2-204ENST00000483851 ACMSDQ8TDX5 336 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 PEX13Q92968 403 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 IFT43Q96FT9 208 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 APOPT1Q96IL0 206 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 SERAC1Q96JX3 654 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 NUDCD1Q96RS6 583 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 TBC1D14Q9P2M4 693 aa26.52■■□□□ 1.84
SHOX2-204ENST00000483851 CCDC195A0A1B0GUA6 201 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 CCNFP41002 786 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 MSLNQ13421 630 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 SLC5A9Q2M3M2 681 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 TEDDM1Q5T9Z0 273 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 MICALL1Q8N3F8 863 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 USP13Q92995 863 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 ZNF707Q96C28 371 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 KDM4CQ9H3R0 1056 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 TREX1Q9NSU2 369 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 C20orf96Q9NUD7 363 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 TCP11X1B4DZS4 312 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 INSIG1O15503 277 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 SNX3O60493 162 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 ASMTLO95671 621 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 ATXN1LP0C7T5 689 aaKnown RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 ALADP13716 330 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 MZF1P28698 734 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 CSKP41240 450 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 CHRNA4P43681 627 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 PLK1P53350 603 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 CSE1LP55060 971 aaKnown RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 SPRED3Q2MJR0 410 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 KIAA0930Q6ICG6 404 aaPredicted RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 RETSATQ6NUM9 610 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 OTUB2Q96DC9 234 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 MAGEB18Q96M61 343 aa26.51■■□□□ 1.83
SHOX2-204ENST00000483851 ELAC2Q9BQ52 826 aaKnown RBP26.51■■□□□ 1.83
SHOX2-204ENST00000483851 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 HMX2A2RU54 273 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 SCAMP3O14828 347 aaKnown RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 PER2O15055 1255 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 RFPL1O75677 317 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 WEE1P30291 646 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 RPA3P35244 121 aaPredicted RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 SPRP35270 261 aaPredicted RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 WDR4P57081 412 aaKnown RBP26.5■■□□□ 1.83
SHOX2-204ENST00000483851 RAB30Q15771 203 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 SIRPB2Q5JXA9 342 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 CNTN4Q8IWV2 1026 aa26.5■■□□□ 1.83
SHOX2-204ENST00000483851 GABPB2Q8TAK5 448 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms