RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 TMCO4Q5TGY1 634 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 KIAA1328Q86T90 577 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 SRLQ86TD4 932 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 TTC7BQ86TV6 843 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 BBS5Q8N3I7 341 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 TSEN2Q8NCE0 465 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 RAB7BQ96AH8 199 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 SKA1Q96BD8 255 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 SERAC1Q96JX3 654 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 CALR3Q96L12 384 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 AASDHPPTQ9NRN7 309 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 DDX56Q9NY93 547 aaKnown RBP18.63■□□□□ 0.57
SMIM4-204ENST00000482728 ALG6Q9Y672 507 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 SPTBN2O15020 2390 aa18.63■□□□□ 0.57
SMIM4-204ENST00000482728 A0A1W2PQU0 124 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 CDX4O14627 284 aaPredicted RBP18.62■□□□□ 0.57
SMIM4-204ENST00000482728 INSIG1O15503 277 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 LATO43561 262 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 KRT1P04264 644 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 XPAP23025 273 aaPredicted RBP18.62■□□□□ 0.57
SMIM4-204ENST00000482728 CSNK1DP48730 415 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 GSDMDP57764 484 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 PPP2CBP62714 309 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 PPP2CAP67775 309 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 NSUN2Q08J23 767 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMIM4-204ENST00000482728 ZNF235Q14590 738 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 PAFAH1B3Q15102 231 aaKnown RBP18.62■□□□□ 0.57
SMIM4-204ENST00000482728 CFAP58Q5T655 872 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 IL27RAQ6UWB1 636 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 PARS2Q7L3T8 475 aaKnown RBP18.62■□□□□ 0.57
SMIM4-204ENST00000482728 TXLNBQ8N3L3 684 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 PAF1Q8N7H5 531 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 FEM1CQ96JP0 617 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 RNF157Q96PX1 679 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 DMTF1Q9Y222 760 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 SLCO1B1Q9Y6L6 691 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 CABIN1Q9Y6J0 2220 aa18.62■□□□□ 0.57
SMIM4-204ENST00000482728 ASCC3Q8N3C0 2202 aaKnown RBP18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ADAMTS9Q9P2N4 1935 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 A0A1B0GVT2 93 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 DCDC2BA2VCK2 349 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 MAFKO60675 156 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 GRIA4P48058 902 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 C21orf59P57076 290 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 SLC10A7Q0GE19 358 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 GRIK2Q13002 908 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 SLC45A4Q5BKX6 768 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 MARC1Q5VT66 337 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 NCBP2-AS2Q69YL0 99 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 DGLUCYQ7Z3D6 616 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 DAAM2Q86T65 1068 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 HORMAD1Q86X24 394 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 MINDY1Q8N5J2 469 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ACRBPQ8NEB7 543 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 RNF25Q96BH1 459 aaPredicted RBP18.61■□□□□ 0.57
SMIM4-204ENST00000482728 FAF2Q96CS3 445 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ZNF641Q96N77 438 aaPredicted RBP18.61■□□□□ 0.57
SMIM4-204ENST00000482728 SLC6A18Q96N87 628 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 PSKH2Q96QS6 385 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ORAI3Q9BRQ5 295 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 SUV39H2Q9H5I1 410 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ATP13A3Q9H7F0 1226 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 EBF2Q9HAK2 575 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 DKK3Q9UBP4 350 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.61■□□□□ 0.57
SMIM4-204ENST00000482728 TRPM6Q9BX84 2022 aa18.61■□□□□ 0.57
SMIM4-204ENST00000482728 ZNF487B1APH4 448 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 C10orf142B7Z368 130 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 SLC31A1O15431 190 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 TSPAN6O43657 245 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 AP1G1O43747 822 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 MFSD11O43934 449 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 OPHN1O60890 802 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 MX2P20592 715 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 CD38P28907 300 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 HSPA9P38646 679 aaKnown RBP18.6■□□□□ 0.57
SMIM4-204ENST00000482728 SCNN1BP51168 640 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 VAV2P52735 878 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 RPS21P63220 83 aaKnown RBP18.6■□□□□ 0.57
SMIM4-204ENST00000482728 GALNT2Q10471 571 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 STAT4Q14765 748 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 IFI16Q16666 785 aaKnown RBP18.6■□□□□ 0.57
SMIM4-204ENST00000482728 NAPEPLDQ6IQ20 393 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 C11orf63Q6NUN7 778 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 VSIG1Q86XK7 387 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 PQLC3Q8N755 202 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 TPCN2Q8NHX9 752 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 HCAR2Q8TDS4 363 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 KLK6Q92876 244 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 ZNF830Q96NB3 372 aaPredicted RBP18.6■□□□□ 0.57
SMIM4-204ENST00000482728 TUBGCP5Q96RT8 1024 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 ANKRD6Q9Y2G4 727 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 REXO2Q9Y3B8 237 aaKnown RBP18.6■□□□□ 0.57
SMIM4-204ENST00000482728 FADS3Q9Y5Q0 445 aa18.6■□□□□ 0.57
SMIM4-204ENST00000482728 DOCK9Q9BZ29 2069 aa18.59■□□□□ 0.57
SMIM4-204ENST00000482728 LAMA1P25391 3075 aa18.59■□□□□ 0.57
SMIM4-204ENST00000482728 RCCD1A6NED2 376 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms