RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 SLC25A11Q02978 314 aaKnown RBP12.05□□□□□ -0.48
HMGN1-213ENST00000482192 FOXC1Q12948 553 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 GRM3Q14832 879 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 CYTH1Q15438 398 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 HADHQ16836 314 aaKnown RBP12.05□□□□□ -0.48
HMGN1-213ENST00000482192 ASTE1Q2TB18 679 aaPredicted RBP12.05□□□□□ -0.48
HMGN1-213ENST00000482192 INAVAQ3KP66 663 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 TMEM259Q4ZIN3 620 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 SEL1L3Q68CR1 1132 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 SARM1Q6SZW1 724 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 H2AFVQ71UI9 128 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 POLNQ7Z5Q5 900 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 ARHGAP12Q8IWW6 846 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 OXR1Q8N573 874 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 RHBDD1Q8TEB9 315 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 VOPP1Q96AW1 172 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 FEM1CQ96JP0 617 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 EXOC2Q96KP1 924 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 CCDC42Q96M95 316 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 KLHL32Q96NJ5 620 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 CSPG4P5Q96PW8 444 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 CDC6Q99741 560 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 CPEB1Q9BZB8 566 aaKnown RBP12.05□□□□□ -0.48
HMGN1-213ENST00000482192 ERVMER34-1Q9H9K5 563 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 LHX3Q9UBR4 397 aa12.05□□□□□ -0.48
HMGN1-213ENST00000482192 PALMO75781 387 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 PROSCO94903 275 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TRIM16O95361 564 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TMEM253P0C7T8 217 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 ABL2P42684 1182 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 SSR1P43307 286 aaKnown RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 ADKP55263 362 aaKnown RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 IL9RQ01113 521 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 IL10RBQ08334 325 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 KRT81Q14533 505 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 RFTN1Q14699 578 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TXNRD3NBQ6F5E7 133 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 GLRX5Q86SX6 157 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TTC7BQ86TV6 843 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 NETO2Q8NC67 525 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 BAHD1Q8TBE0 780 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 HCAR2Q8TDS4 363 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 KLK6Q92876 244 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 KLHDC7BQ96G42 594 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TUBGCP5Q96RT8 1024 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 MYOCQ99972 504 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 CINPQ9BW66 212 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 PACSIN1Q9BY11 444 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 SLC17A9Q9BYT1 436 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 TRIM5Q9C035 493 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 PCDH18Q9HCL0 1135 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 RCOR3Q9P2K3 495 aaPredicted RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 DKK3Q9UBP4 350 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 ZFR2Q9UPR6 939 aaKnown RBP12.04□□□□□ -0.48
HMGN1-213ENST00000482192 PI4KAP42356 2102 aa12.04□□□□□ -0.48
HMGN1-213ENST00000482192 AKR1B15C9JRZ8 316 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 AREL1O15033 823 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 INSIG1O15503 277 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 THEGLP0DJG4 465 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 AMPD1P23109 780 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 EPHA8P29322 1005 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 MAN1A1P33908 653 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 SERPINB6P35237 376 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 CSNK1DP48730 415 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 SUOXP51687 545 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 SGCGQ13326 291 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 SHBQ15464 509 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 PRAMEF14Q5SWL7 426 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 CFAP58Q5T655 872 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 SPATS2Q86XZ4 545 aaKnown RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 FAM174AQ8TBP5 190 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 FAM71BQ8TC56 605 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 TSC1Q92574 1164 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 ZNF641Q96N77 438 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 ZNF599Q96NL3 588 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 CHP1Q99653 195 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 C1QTNF2Q9BXJ5 285 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 NHEJ1Q9H9Q4 299 aaPredicted RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 FZD3Q9NPG1 666 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 IPO11Q9UI26 975 aaKnown RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 APOBEC2Q9Y235 224 aaKnown RBP12.03□□□□□ -0.48
HMGN1-213ENST00000482192 ITM2BQ9Y287 266 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 CA5BQ9Y2D0 317 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 BTBD3Q9Y2F9 522 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 CACNA1EQ15878 2313 aa12.03□□□□□ -0.48
HMGN1-213ENST00000482192 NCOR2Q9Y618 2525 aa12.02□□□□□ -0.48
HMGN1-213ENST00000482192 GON4LQ3T8J9 2241 aa12.02□□□□□ -0.48
HMGN1-213ENST00000482192 TSPAN11A1L157 253 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 A6NNZ2 444 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 SPINT1O43278 529 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 PIGNO95427 931 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 PAK4O96013 591 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-213ENST00000482192 ITGAVP06756 1048 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 KRT7P08729 469 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 XPAP23025 273 aaPredicted RBP12.02□□□□□ -0.49
HMGN1-213ENST00000482192 SERPINA4P29622 427 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 RXRGP48443 463 aa12.02□□□□□ -0.49
HMGN1-213ENST00000482192 CDH6P55285 790 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms