RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CXorf51AA0A1B0GTR3 108 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 ANKRD62A6NC57 917 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 RASA4BC9J798 803 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 NEMP1O14524 444 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 INSIG1O15503 277 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 RASA4O43374 803 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 SGCGQ13326 291 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 ZNF211Q13398 564 aaPredicted RBP18.83■□□□□ 0.6
CLK1-211ENST00000481641 FZD2Q14332 565 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 GDPD4Q6W3E5 623 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 TMC6Q7Z403 805 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 OR4C6Q8NH72 309 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 EPAS1Q99814 870 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 C1QTNF2Q9BXJ5 285 aa18.83■□□□□ 0.6
CLK1-211ENST00000481641 RTN4Q9NQC3 1192 aaKnown RBP18.83■□□□□ 0.6
CLK1-211ENST00000481641 LRRC53A6NM62 1247 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 TSPAN6O43657 245 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 NEBLO76041 1014 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 ACP1P24666 158 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 HNF1BP35680 557 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 RHOAP61586 193 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 DAB2P98082 770 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 CA9Q16790 459 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 KYAT3Q6YP21 454 aaKnown RBP18.82■□□□□ 0.6
CLK1-211ENST00000481641 LRIG1Q96JA1 1093 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 EXOC2Q96KP1 924 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 GDAP1L1Q96MZ0 367 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 TTYH3Q9C0H2 523 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 GPR27Q9NS67 375 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 KLF15Q9UIH9 416 aa18.82■□□□□ 0.6
CLK1-211ENST00000481641 ZSCAN5CA6NGD5 496 aaPredicted RBP18.81■□□□□ 0.6
CLK1-211ENST00000481641 WASH4PA8MWX3 477 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 MMP20O60882 483 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 CCDC172P0C7W6 258 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 CDK4P11802 303 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 INSM1Q01101 510 aaPredicted RBP18.81■□□□□ 0.6
CLK1-211ENST00000481641 ILKQ13418 452 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 MAMLD1Q13495 774 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 SERINC3Q13530 473 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 PDE1CQ14123 709 aaPredicted RBP18.81■□□□□ 0.6
CLK1-211ENST00000481641 CYTH1Q15438 398 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 E4F1Q66K89 784 aaPredicted RBP18.81■□□□□ 0.6
CLK1-211ENST00000481641 TTC7BQ86TV6 843 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 ARFGAP1Q8N6T3 406 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 RAB7BQ96AH8 199 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 CELF6Q96J87 481 aaKnown RBP18.81■□□□□ 0.6
CLK1-211ENST00000481641 OSBPL1AQ9BXW6 950 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 TRIM7Q9C029 511 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 CATSPERBQ9H7T0 1116 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 LHX3Q9UBR4 397 aa18.81■□□□□ 0.6
CLK1-211ENST00000481641 SPTY2D1-AS1A0A0U1RR47 76 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 J3KR12 359 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 FPGTO14772 594 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 AREL1O15033 823 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 PIGNO95427 931 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 IGSF6O95976 241 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 TIMP2P16035 220 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 PSMA2P25787 234 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 YBEYP58557 167 aaPredicted RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 TPI1P60174 286 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 ASIC2Q16515 512 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 HS1BP3Q53T59 392 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 ZNF571Q7Z3V5 609 aaPredicted RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 DCP2Q8IU60 420 aaKnown RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 UMODL1-AS1Q8N2C9 162 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 NAP1L5Q96NT1 182 aaPredicted RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 LENG8Q96PV6 779 aaPredicted RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 PEBP4Q96S96 227 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 NAT10Q9H0A0 1025 aaKnown RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 HAUS4Q9H6D7 363 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 PCSK1NQ9UHG2 260 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 IPO11Q9UI26 975 aaKnown RBP18.8■□□□□ 0.6
CLK1-211ENST00000481641 AP4E1Q9UPM8 1137 aa18.8■□□□□ 0.6
CLK1-211ENST00000481641 LY6G6EA0A0G2JKS1 128 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 SCAMP1O15126 338 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 RABIFP47224 123 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 AIF1P55008 147 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 SEMG2Q02383 582 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 EIF2B5Q13144 721 aaKnown RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 PARP15Q460N3 678 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 INO80DQ53TQ3 878 aaPredicted RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 PLEKHA7Q6IQ23 1121 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 VPS36Q86VN1 386 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 FAM174AQ8TBP5 190 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 CASKIN2Q8WXE0 1202 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 IFT43Q96FT9 208 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 APOLD1Q96LR9 279 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 DCBLD2Q96PD2 775 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 KCTD15Q96SI1 283 aaPredicted RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 BPIFA3Q9BQP9 254 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 WRAP53Q9BUR4 548 aaKnown RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 DHX35Q9H5Z1 703 aaKnown RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 LRRC19Q9H756 370 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 PARVAQ9NVD7 372 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 NLGN3Q9NZ94 848 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 UBA2Q9UBT2 640 aaPredicted RBP18.79■□□□□ 0.6
CLK1-211ENST00000481641 MYO6Q9UM54 1294 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 AK5Q9Y6K8 562 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 U3KQA8 63 aa18.79■□□□□ 0.6
CLK1-211ENST00000481641 SMTNL1A8MU46 457 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms