RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 ARL4AP40617 200 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 CSNK1DP48730 415 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 BLKP51451 505 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 RENBPP51606 427 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 METAP1P53582 386 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 UBASH3AP57075 661 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 YPEL5P62699 121 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 POLR2LP62875 67 aaKnown RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 IL9RQ01113 521 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 BOLA3Q53S33 107 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 KCNT1Q5JUK3 1230 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 FAM72AQ5TYM5 149 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 FAM72DQ6L9T8 149 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 RFX8Q6ZV50 586 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 PTAR1Q7Z6K3 402 aaPredicted RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 PHLDB2Q86SQ0 1253 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 FAM72BQ86X60 149 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 PROSER1Q86XN7 944 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 OR4C6Q8NH72 309 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 GLMNQ92990 594 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 ZNF653Q96CK0 615 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 ZNF599Q96NL3 588 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 DHX35Q9H5Z1 703 aaKnown RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 ATP13A3Q9H7F0 1226 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 SP110Q9HB58 689 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 NLGN3Q9NZ94 848 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 CNOT8Q9UFF9 292 aaKnown RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 IPO11Q9UI26 975 aaKnown RBP11.61□□□□□ -0.55
CCM2-213ENST00000480658 BTBD3Q9Y2F9 522 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCM2-213ENST00000480658 CSNK1G3Q9Y6M4 447 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 CHD8Q9HCK8 2581 aa11.61□□□□□ -0.55
CCM2-213ENST00000480658 CFAP69A5D8W1 941 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 TMEM110-MUSTN1A8MSY1 372 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 TMCO5BA8MYB1 307 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 H3BRJ5 948 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 PLK4O00444 970 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 TM7SF2O76062 418 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 CD160O95971 181 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 SERPING1P05155 500 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 TPM1P09493 284 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 PRLRP16471 622 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 THOP1P52888 689 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 ZBED6P86452 979 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 NSUN2Q08J23 767 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCM2-213ENST00000480658 TRIM14Q14142 442 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 IQCB1Q15051 598 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 RALGPS1Q5JS13 557 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 ARTNQ5T4W7 220 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 GCNT7Q6ZNI0 430 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 TTC7BQ86TV6 843 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 SLCO6A1Q86UG4 719 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 GATAD2AQ86YP4 633 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 LRRC49Q8IUZ0 686 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 SDR16C5Q8N3Y7 309 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 EID2Q8N6I1 236 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 PNPLA1Q8N8W4 532 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 NSMCE1Q8WV22 266 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 GRAMD1AQ96CP6 724 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 HMCESQ96FZ2 354 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 ISCUQ9H1K1 167 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 LRRC19Q9H756 370 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 GPR27Q9NS67 375 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 NDFIP2Q9NV92 336 aa11.6□□□□□ -0.55
CCM2-213ENST00000480658 RCOR3Q9P2K3 495 aaPredicted RBP11.6□□□□□ -0.55
CCM2-213ENST00000480658 LUC7L2Q9Y383 392 aaKnown RBP11.6□□□□□ -0.55
CCM2-213ENST00000480658 SPTY2D1-AS1A0A0U1RR47 76 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 SYCE3A1L190 88 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 KCNK3O14649 394 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 AREL1O15033 823 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 CBFA2T2O43439 604 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 PRAMEF11O60813 436 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 PALMO75781 387 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 PIAS2O75928 621 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 GJB6O95452 261 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 CSF2P04141 144 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 KRT10P13645 584 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 NME1P15531 152 aaKnown RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 HTR1BP28222 390 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 RPIAP49247 311 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 ACADVLP49748 655 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 PEX5P50542 639 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 AP1S1P61966 158 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 DAB2P98082 770 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 FANCCQ00597 558 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 IL10RBQ08334 325 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 SHBQ15464 509 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 DPYSL2Q16555 572 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 TSR1Q2NL82 804 aaKnown RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 PPP6R3Q5H9R7 873 aaPredicted RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 ZCCHC8Q6NZY4 707 aaKnown RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 Q6ZSR6 202 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 ZNF571Q7Z3V5 609 aaPredicted RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 SPATS2Q86XZ4 545 aaKnown RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 PAF1Q8N7H5 531 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 NIPA2Q8N8Q9 360 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 FAM181AQ8N9Y4 354 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 WDR48Q8TAF3 677 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 TEKT4Q8WW24 435 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms