RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 LRRC4CQ9HCJ2 640 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDHGC3Q9UN70 934 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 R3HDM2Q9Y2K5 976 aaKnown RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 ASTN1O14525 1302 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC22A1O15245 554 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 DYNC1LI2O43237 492 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 NTRK1P04629 796 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 SHMT1P34896 483 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 GUCA1AP43080 201 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 ASMTP46597 345 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 MAP1BP46821 2468 aaKnown RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 LIMK2P53671 638 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 ASTE1Q2TB18 679 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 GPSM1Q86YR5 675 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 RAB43Q86YS6 212 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 MAGEE2Q8TD90 523 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 SPOCK2Q92563 424 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 ITFG2Q969R8 447 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 LBHD1Q9BQE6 289 aaPredicted RBP6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 DMAC2Q9NW81 257 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 PCDHA11Q9Y5I1 949 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 NWD1Q149M9 1564 aa6.21□□□□□ -1.42
PRPF4B-205ENST00000480058 PDLIM1O00151 329 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CYB561D2O14569 222 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EPHB6O15197 1021 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 NPHS1O60500 1241 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 B4GALT4O60513 344 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TMCC2O75069 709 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 NR4A1P22736 598 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PCSK7Q16549 785 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TUBA3EQ6PEY2 450 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KBTBD2Q8IY47 623 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PEX5LQ8IYB4 626 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 IPCEF1Q8WWN9 437 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 IL17RBQ9NRM6 502 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PRR5-ARHGAP8B1AHC4 643 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PTGES3LE9PB15 166 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZBTB14O43829 449 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SIN3BO75182 1162 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SEC22BO75396 215 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ALDH1A2O94788 518 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TFEBP19484 476 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 MATKP42679 507 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 NDST1P52848 882 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EEFSECP57772 596 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TUBA1BP68363 451 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ARHGAP8P85298 464 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FOXM1Q08050 763 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RNASEH2BQ5TBB1 312 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZDHHC20Q5W0Z9 365 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 LCLAT1Q6UWP7 414 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CYS1Q717R9 158 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TUBA1AQ71U36 451 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 C4orf32Q8N8J7 132 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PTGR2Q8N8N7 351 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GLT1D1Q96MS3 346 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 REXO4Q9GZR2 422 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.426e-7■■■■□ 21.6
PRPF4B-205ENST00000480058 CYP4F12Q9HCS2 524 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ABCC13Q9NSE7 274 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CMTM6Q9NX76 183 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CCDC59Q9P031 241 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 MKLN1Q9UL63 735 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SSR3Q9UNL2 185 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CRYL1Q9Y2S2 319 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ARIH1Q9Y4X5 557 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PENKP01210 267 aaPredicted RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CAPN1P07384 714 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SNHG28P0DPA3 235 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 HGFP14210 728 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SLC7A1P30825 629 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CYP2R1Q6VVX0 501 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PTF1AQ7RTS3 328 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 PAGE2Q7Z2X7 111 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KCNK18Q7Z418 384 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 AKAP14Q86UN6 197 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RIOX2Q8IUF8 465 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ZFPM1Q8IX07 1006 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 CPSF7Q8N684 471 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ENDOVQ8N8Q3 282 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TRPV1Q8NER1 839 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FIG4Q92562 907 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 FBXO32Q969P5 355 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RCN3Q96D15 328 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 NTPCRQ9BSD7 190 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RNPEPQ9H4A4 650 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 RIBC2Q9H4K1 309 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EHD3Q9NZN3 535 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 GNEQ9Y223 722 aaKnown RBP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ITM2BQ9Y287 266 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 STXBP5LQ9Y2K9 1186 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 TRAF6Q9Y4K3 522 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KCNE2Q9Y6J6 123 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 H3BRB1 525 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 KCNK1O00180 336 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 EML1O00423 815 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ADAMDEC1O15204 470 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 ITGA10O75578 1167 aa6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 YBX3P16989 372 aaKnown RBP eCLIP6.2□□□□□ -1.42
PRPF4B-205ENST00000480058 SOAT1P35610 550 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms