RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 STAP1Q9ULZ2 295 aa16.36■□□□□ 0.21
DDX56-210ENST00000479440 ILVBLA1L0T0 632 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 CASC3O15234 703 aaKnown RBP16.35■□□□□ 0.21
DDX56-210ENST00000479440 ZNF821O75541 412 aaPredicted RBP16.35■□□□□ 0.21
DDX56-210ENST00000479440 SMC2O95347 1197 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 CD82P27701 267 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 PPP1R2P41236 205 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 TBR1Q16650 682 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 LVRNQ6Q4G3 990 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 OLFML1Q6UWY5 402 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 SLC26A9Q7LBE3 791 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 PCDH19Q8TAB3 1148 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 FAM81BQ96LP2 452 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 SPON2Q9BUD6 331 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 SCAND2PQ9GZW5 306 aaPredicted RBP16.35■□□□□ 0.21
DDX56-210ENST00000479440 CLPBQ9H078 707 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 PIGVQ9NUD9 493 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 TMEM51Q9NW97 253 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 SIRPGQ9P1W8 387 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 ITM2BQ9Y287 266 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 FCF1Q9Y324 198 aaKnown RBP16.35■□□□□ 0.21
DDX56-210ENST00000479440 UBR5O95071 2799 aaPredicted RBP16.35■□□□□ 0.21
DDX56-210ENST00000479440 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
DDX56-210ENST00000479440 DRGXA6NNA5 263 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 C16orf96A6NNT2 1141 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 SULT1E1P49888 294 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 CCL7P80098 99 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 ZNF805Q5CZA5 627 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 OTUD1Q5VV17 481 aaPredicted RBP16.34■□□□□ 0.21
DDX56-210ENST00000479440 VASH2Q86V25 355 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 VPS36Q86VN1 386 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 GKN2Q86XP6 184 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 ZNF683Q8IZ20 524 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 ZNF397Q8NF99 534 aaPredicted RBP16.34■□□□□ 0.21
DDX56-210ENST00000479440 CENPTQ96BT3 561 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 TM6SF2Q9BZW4 377 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 ADNPQ9H2P0 1102 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 SYNCQ9H7C4 482 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 UBE2TQ9NPD8 197 aaPredicted RBP16.34■□□□□ 0.21
DDX56-210ENST00000479440 GEMIN8Q9NWZ8 242 aaKnown RBP16.34■□□□□ 0.21
DDX56-210ENST00000479440 MPP6Q9NZW5 540 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 HECAQ9UBI9 543 aaPredicted RBP16.34■□□□□ 0.21
DDX56-210ENST00000479440 GGT7Q9UJ14 662 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 RABGEF1Q9UJ41 708 aa16.34■□□□□ 0.21
DDX56-210ENST00000479440 IGLV3-10A0A075B6K4 115 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PRAMEF33A0A0G2JMD5 474 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 CXorf51AA0A1B0GTR3 108 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 A0A1W2PQC6 194 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PRAMEF10O60809 474 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 TM7SF2O76062 418 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 F9P00740 461 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 CTSEP14091 401 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 EIF4A3P38919 411 aaKnown RBP16.33■□□□□ 0.2
DDX56-210ENST00000479440 ARF5P84085 180 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 ZDHHC17Q8IUH5 632 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 CCNJLQ8IV13 435 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PASD1Q8IV76 773 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PLPP6Q8IY26 295 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 RYBPQ8N488 228 aaPredicted RBP16.33■□□□□ 0.2
DDX56-210ENST00000479440 CXorf40AQ8TE69 158 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 SMARCE1Q969G3 411 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 ISG20Q96AZ6 181 aaKnown RBP16.33■□□□□ 0.2
DDX56-210ENST00000479440 DHTKD1Q96HY7 919 aaPredicted RBP16.33■□□□□ 0.2
DDX56-210ENST00000479440 NPY6RQ99463 290 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 CMKLR1Q99788 373 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 EPAS1Q99814 870 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 OSBPL1AQ9BXW6 950 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 EDEM3Q9BZQ6 932 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 LRRN3Q9H3W5 708 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PNMA8BQ9ULN7 279 aaPredicted RBP16.33■□□□□ 0.2
DDX56-210ENST00000479440 GPR34Q9UPC5 381 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 SNX10Q9Y5X0 201 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 BSNQ9UPA5 3926 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 PTPN13Q12923 2485 aa16.33■□□□□ 0.2
DDX56-210ENST00000479440 A0A1W2PQM1 296 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 ZMPSTE24O75844 475 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 RASGRP1O95267 797 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 ERBB2P04626 1255 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 CELA2BP08218 269 aaPredicted RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 GP1BBP13224 206 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 ITIH1P19827 911 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 ETFBP38117 255 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 CXCR3P49682 368 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 HK3P52790 923 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 SLC6A3Q01959 620 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 DEUP1Q05D60 604 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 MORC3Q14149 939 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 UBAP2LQ14157 1087 aaKnown RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 POLD3Q15054 466 aaPredicted RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 C1orf131Q8NDD1 294 aaKnown RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 OR6K2Q8NGY2 324 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 PGAP3Q96FM1 320 aaPredicted RBP16.32■□□□□ 0.2
DDX56-210ENST00000479440 C1orf74Q96LT6 269 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 FUCA2Q9BTY2 467 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 PIEZO2Q9H5I5 2752 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 ACP6Q9NPH0 428 aa16.32■□□□□ 0.2
DDX56-210ENST00000479440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.32■□□□□ 0.2
DDX56-210ENST00000479440 PCDHGC3Q9UN70 934 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms