RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ATP6AP2O75787 350 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PFKPQ01813 784 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 LRRC23Q53EV4 343 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 RNF43Q68DV7 783 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 RFWD3Q6PCD5 774 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PCDH20Q8N6Y1 951 aaKnown RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 ZNF398Q8TD17 642 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 MFSD3Q96ES6 412 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 TBC1D10AQ9BXI6 508 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 MOXD2PA6NHM9 499 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 E9PAM4 449 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PPEF2O14830 753 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PLCL1Q15111 1095 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 CA9Q16790 459 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 ACBD5Q5T8D3 534 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 DOK6Q6PKX4 331 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 SPATA22Q8NHS9 363 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 KCTD14Q9BQ13 255 aaPredicted RBP14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PHACTR1Q9C0D0 580 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 TMPRSS4Q9NRS4 437 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 IMPAD1Q9NX62 359 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 SNX10Q9Y5X0 201 aa14.34□□□□□ -0.11
NPHP4-208ENST00000478423 PEX11AO75192 247 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 ACADMP11310 421 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 PSMC3P17980 439 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 LBPP18428 481 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 CDH13P55290 713 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 YBEYP58557 167 aaPredicted RBP14.33□□□□□ -0.11
NPHP4-208ENST00000478423 MAD2L1Q13257 205 aaPredicted RBP14.33□□□□□ -0.11
NPHP4-208ENST00000478423 IYDQ6PHW0 289 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 C10orf107Q8IVU9 208 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 ZNF567Q8N184 647 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 SLAIN1Q8ND83 568 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 UPF1Q92900 1129 aaKnown RBP eCLIP14.33□□□□□ -0.11
NPHP4-208ENST00000478423 SH3GL2Q99962 352 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 SCN3BQ9NY72 215 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 SORCS3Q9UPU3 1222 aa14.33□□□□□ -0.11
NPHP4-208ENST00000478423 MAGEA13PA6NCF6 341 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 C5orf60A6NFR6 353 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 HNRNPCL2B2RXH8 293 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 AGPSO00116 658 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 USP1O94782 785 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 INHAP05111 366 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ANXA5P08758 320 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 HNRNPLP14866 589 aaKnown RBP eCLIP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 RHOQP17081 205 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 EPHA3P29320 983 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 CHI3L1P36222 383 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 GABRB2P47870 512 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 RFX3P48380 749 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ACLYP53396 1101 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 IRF8Q02556 426 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 OLFML2BQ68BL8 750 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 OR4L1Q8NH43 312 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 RIN3Q8TB24 985 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SLC9A7Q96T83 725 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 DTLQ9NZJ0 730 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SELENONQ9NZV5 590 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 TDRKHQ9Y2W6 561 aaKnown RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SDK1Q7Z5N4 2213 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 CCDC154A6NI56 674 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 LYPLA1O75608 230 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 NOVP48745 357 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 GDF10P55107 478 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SLC25A3Q00325 362 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SLC34A1Q06495 639 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ACSM2AQ08AH3 577 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 WASHC5Q12768 1159 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SLC1A5Q15758 541 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ACSM2BQ68CK6 577 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 GRAMD4Q6IC98 578 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 DRICH1Q6PGQ1 229 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SERPINA13PQ6UXR4 307 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 OTOP2Q7RTS6 562 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 DHFR2Q86XF0 187 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 SCAMP5Q8TAC9 235 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 MARK4Q96L34 752 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 KLHL4Q9C0H6 718 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ENO4A6NNW6 628 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 TULP2O00295 520 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ZMPSTE24O75844 475 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 AP2A1O95782 977 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 CORO1AP31146 461 aaKnown RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 PIK3CGP48736 1102 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 ALDH9A1P49189 494 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 KCNJ2P63252 427 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 C12orf65Q9H3J6 166 aaKnown RBP14.33□□□□□ -0.12
NPHP4-208ENST00000478423 GGA2Q9UJY4 613 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 RAP2CQ9Y3L5 183 aa14.33□□□□□ -0.12
NPHP4-208ENST00000478423 BIRC5O15392 142 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 CD3EAPO15446 510 aaKnown RBP14.32□□□□□ -0.12
NPHP4-208ENST00000478423 TLL1O43897 1013 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 GLUD1P00367 558 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 CREMQ03060 361 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 USP4Q13107 963 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 QPCTQ16769 361 aa14.32□□□□□ -0.12
NPHP4-208ENST00000478423 RNF168Q8IYW5 571 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms