RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 TTC7AQ9ULT0 858 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 CAMK2AQ9UQM7 478 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PCDHGA1Q9Y5H4 931 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 MRFAP1Q9Y605 127 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 INO80Q9ULG1 1556 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 NCANO14594 1321 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 RPTORQ8N122 1335 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 IGSF1Q8N6C5 1336 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 SH3TC1Q8TE82 1336 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 RPAP1Q9BWH6 1393 aaPredicted RBP3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 PLEKHG2Q9H7P9 1386 aa3.62□□□□□ -1.83
FNDC3B-209ENST00000478016 REREQ9P2R6 1566 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 C15orf38-AP3S2A0A0A6YYH1 394 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 C1orf232A0A0U1RR37 186 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 A0A1B0GUA9 196 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 LOC105371267A0A1B0GV96 52 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KRTAP9-7A8MTY7 169 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 E9PBE3 544 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 H0YAE9 185 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 K7ERQ8 282 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MYO1CO00159 1063 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 GTPBP1O00178 669 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ACKR2O00590 384 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PRRG2O14669 202 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CD3EAPO15446 510 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PROM1O43490 865 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PLA2G6O60733 806 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 BCAS2O75934 225 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 TSPAN9O75954 239 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 FLOT1O75955 427 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 BEST1O76090 585 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 GASTP01350 101 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 IFNB1P01574 187 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 HLA-DRAP01903 254 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CSF2P04141 144 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 FESP07332 822 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CSF1P09603 554 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 POU2F1P14859 743 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 NAGAP17050 411 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ACO1P21399 889 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 TGM1P22735 817 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CPN2P22792 545 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CFL1P23528 166 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 U2AF2P26368 475 aaKnown RBP eCLIP3.61□□□□□ -1.831e-6■■□□□ 14.2
FNDC3B-209ENST00000478016 PTBP1P26599 531 aaKnown RBP eCLIP3.61□□□□□ -1.831e-7■□□□□ 10.4
FNDC3B-209ENST00000478016 HOXC8P31273 242 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 SERPINF1P36955 418 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 GP5P40197 560 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CASRP41180 1078 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CASP3P42574 277 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MAGEA4P43358 317 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MAGEA9P43362 315 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 LUMP51884 338 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ADARP55265 1226 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 EIF3EP60228 445 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CYP4F2P78329 520 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 S100A12P80511 92 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF543Q08ER8 600 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RPA4Q13156 261 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RFTN1Q14699 578 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 STARD3Q14849 445 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KRT31Q15323 416 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 LLGL1Q15334 1064 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 SMAD1Q15797 465 aaKnown RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 SMU1Q2TAY7 513 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MST1LQ2TV78 715 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ADCK5Q3MIX3 580 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 HSP90AA5PQ58FG0 334 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 IGSF11Q5DX21 431 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PPP6R3Q5H9R7 873 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RNF220Q5VTB9 566 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MFSD5Q6N075 450 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF585AQ6P3V2 769 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ERICH5Q6P6B1 374 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 NOTUMQ6P988 496 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 TRIM65Q6PJ69 517 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ABHD15Q6UXT9 468 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KDM7AQ6ZMT4 941 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 DENND5BQ6ZUT9 1274 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 PRRT2Q7Z6L0 340 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ASPGQ86U10 573 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MOGAT3Q86VF5 341 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 UNC5CLQ8IV45 518 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 KIAA2013Q8IYS2 634 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 BBS5Q8N3I7 341 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 D2HGDHQ8N465 521 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 LIX1Q8N485 282 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF321PQ8N8H1 164 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RNF152Q8N8N0 203 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 GPR156Q8NFN8 814 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 OR52M1Q8NGK5 317 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 OR5M3Q8NGP4 307 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 OR9A1PQ8NGU1 263 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CLHC1Q8NHS4 586 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 CAGE1Q8TC20 777 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 ZNF480Q8WV37 535 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 MAIP1Q8WWC4 291 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 RIN2Q8WYP3 895 aaPredicted RBP3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 EDAQ92838 391 aa3.61□□□□□ -1.83
FNDC3B-209ENST00000478016 DVL3Q92997 716 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms