RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-222	ENST00000477937	HCAR3	P49019	387 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	BNIP3	Q12983	259 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	MAPK8IP2	Q13387	824 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	PIGH	Q14442	188 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	SHB	Q15464	509 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	BOLA3	Q53S33	107 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	ALKBH5	Q6P6C2	394 aa	Known RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	UNQ6494/PRO21346	Q6UXR6	183 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	TTC7B	Q86TV6	843 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	FAM174A	Q8TBP5	190 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	SAP25	Q8TEE9	199 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	CELF6	Q96J87	481 aa	Known RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	CPEB1	Q9BZB8	566 aa	Known RBP	14	□□□□□ -0.17
HDAC7-222	ENST00000477937	SLC39A8	Q9C0K1	460 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	THAP2	Q9H0W7	228 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	ZWILCH	Q9H900	591 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	FZD3	Q9NPG1	666 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	FTSJ1	Q9UET6	329 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	MFHAS1	Q9Y4C4	1052 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	HS3ST3A1	Q9Y663	406 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	ACACB	O00763	2458 aa		14	□□□□□ -0.17
HDAC7-222	ENST00000477937	LRRK1	Q38SD2	2015 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	FAM221B	A6H8Z2	402 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	GOLGA8CP	A6NN73	597 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	C1QTNF9B	B2RNN3	333 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937		J3KR12	359 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	CBFA2T2	O43439	604 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	PRAMEF11	O60813	436 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	PAK4	O96013	591 aa	Predicted RBP	13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	PROS1	P07225	676 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	C1QTNF9	P0C862	333 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	EPHA8	P29322	1005 aa	Predicted RBP	13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	PAPOLA	P51003	745 aa	Known RBP	13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	SGCG	Q13326	291 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	GRM3	Q14832	879 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	CYTH1	Q15438	398 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	CCDC122	Q5T0U0	273 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	LZTR1	Q8N653	840 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	NETO2	Q8NC67	525 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	PDF	Q9HBH1	243 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	CWC15	Q9P013	229 aa	Known RBP	13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	LHX3	Q9UBR4	397 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	IP6K2	Q9UHH9	426 aa		13.99	□□□□□ -0.17
HDAC7-222	ENST00000477937	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	IGLON5	A6NGN9	336 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937		A6NNZ2	444 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	DFFA	O00273	331 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	PALM	O75781	387 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	LDOC1	O95751	146 aa	Predicted RBP	13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	CYP1A2	P05177	515 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	ARL4A	P40617	200 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	ABL2	P42684	1182 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	CLDN2	P57739	230 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	AFMID	Q63HM1	303 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	ABI3BP	Q7Z7G0	1075 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	DCP2	Q8IU60	420 aa	Known RBP	13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	EID2	Q8N6I1	236 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	NIPA2	Q8N8Q9	360 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	OR13H1	Q8NG92	308 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	HSPH1	Q92598	858 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	GATA6	Q92908	595 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	VOPP1	Q96AW1	172 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	EXOC2	Q96KP1	924 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	LENG8	Q96PV6	779 aa	Predicted RBP	13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	NUP85	Q9BW27	656 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	C1QTNF2	Q9BXJ5	285 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	CALN1	Q9BXU9	219 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	TSPY26P	Q9H489	355 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	TOR4A	Q9NXH8	423 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	DKK3	Q9UBP4	350 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	ANAPC7	Q9UJX3	599 aa		13.98	□□□□□ -0.17
HDAC7-222	ENST00000477937	MAP1B	P46821	2468 aa	Known RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937		H3BRJ5	948 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	MYO1F	O00160	1098 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	ENC1	O14682	589 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	AREL1	O15033	823 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	INSIG1	O15503	277 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	DKK1	O94907	266 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	TPM1	P09493	284 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	XPA	P23025	273 aa	Predicted RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	IL1R2	P27930	398 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	HNRNPH3	P31942	346 aa	Known RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	IL10RB	Q08334	325 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	DPYS	Q14117	519 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	TRIM14	Q14142	442 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	FGL2	Q14314	439 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	DPYSL2	Q16555	572 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	TSR1	Q2NL82	804 aa	Known RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	SMTNL2	Q2TAL5	461 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	SPECC1L	Q69YQ0	1117 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	GCNT7	Q6ZNI0	430 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937		Q6ZSR6	202 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	POLN	Q7Z5Q5	900 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	PTAR1	Q7Z6K3	402 aa	Predicted RBP	13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	ARHGAP12	Q8IWW6	846 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	OR8K1	Q8NGG5	319 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	HCAR2	Q8TDS4	363 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	TEKT4	Q8WW24	435 aa		13.97	□□□□□ -0.17
HDAC7-222	ENST00000477937	ASB12	Q8WXK4	309 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms