RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 AFF1P51825 1210 aaKnown RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 LIMK2P53671 638 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 KLF10Q13118 480 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ARHGEF7Q14155 803 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 PTPRNQ16849 979 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 INTS6LQ5JSJ4 861 aaKnown RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 TEDDM1Q5T9Z0 273 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 EMC10Q5UCC4 262 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ZBTB49Q6ZSB9 765 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 FSTL5Q8N475 847 aaPredicted RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 C7orf26Q96N11 449 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 RBBP8Q99708 897 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SMOQ99835 787 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ECSITQ9BQ95 431 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 DRC3Q9H069 523 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 CLPBQ9H078 707 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 ABCG8Q9H221 673 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 AGO3Q9H9G7 860 aaKnown RBP11.14□□□□□ -0.63
COL27A1-204ENST00000477421 TAS2R13Q9NYV9 303 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SLC8A2Q9UPR5 921 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 SCN7AQ01118 1682 aa11.14□□□□□ -0.63
COL27A1-204ENST00000477421 URB1O60287 2271 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 FGF10O15520 208 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 LTA4HP09960 611 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 RGS4P49798 205 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GHRHRQ02643 423 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 PRKD1Q15139 912 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 LIPMQ5VYY2 423 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 SLC9A4Q6AI14 798 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CLEC6AQ6EIG7 209 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 RPS27LQ71UM5 84 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 MON1AQ86VX9 555 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 SPDYE1Q8NFV5 336 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GANCQ8TET4 914 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 WDR60Q8WVS4 1066 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 PSMG2Q969U7 264 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 DCUN1D1Q96GG9 259 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 TEKT5Q96M29 485 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 SLC39A8Q9C0K1 460 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CRTAC1Q9NQ79 661 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 UBA2Q9UBT2 640 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 RAP2CQ9Y3L5 183 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ZBTB42B2RXF5 422 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 H2AFYO75367 372 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CNMDO75829 334 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 F2P00734 622 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CYBBP04839 570 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ATP5F1P24539 256 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 PIK3R1P27986 724 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 OR1D2P34982 312 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 PHEXP78562 749 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GPR158Q5T848 1215 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 LINGO4Q6UY18 593 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ELMOD1Q8N336 334 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 SEPT8Q92599 483 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 OLFM3Q96PB7 478 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CDH19Q9H159 772 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GBA3Q9H227 469 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GID8Q9NWU2 228 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 RCOR3Q9P2K3 495 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 KANSL3Q9P2N6 904 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 MYH9P35579 1960 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 E9PAM4 449 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 DUSP11O75319 330 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF23P17027 643 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ATP5C1P36542 298 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CCR10P46092 362 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 CCDC15Q0P6D6 951 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GRIK3Q13003 919 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 GDF6Q6KF10 455 aaPredicted RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 AMIGO2Q86SJ2 522 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 DDX53Q86TM3 631 aaKnown RBP11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF778Q96MU6 729 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 C17orf80Q9BSJ5 609 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 PIDD1Q9HB75 910 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 SYTL2Q9HCH5 934 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 THEGQ9P2T0 379 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 ZNF212Q9UDV6 495 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 VWA7Q9Y334 891 aa11.13□□□□□ -0.63
COL27A1-204ENST00000477421 TBX10O75333 385 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CABYRO75952 493 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PRKCGP05129 697 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 CTPS1P17812 591 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 NAB1Q13506 487 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PPP1R15BQ5SWA1 713 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 ANKS6Q68DC2 871 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 ARHGAP36Q6ZRI8 547 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 MFN1Q8IWA4 741 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 FNDC5Q8NAU1 212 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 DNAJB14Q8TBM8 379 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 METTL6Q8TCB7 284 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 SPATA17Q96L03 361 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PRPF18Q99633 342 aaKnown RBP11.12□□□□□ -0.63
COL27A1-204ENST00000477421 RUBCNLQ9H714 662 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 LTBP3Q9NS15 1303 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 PRKAG2Q9UGJ0 569 aa11.12□□□□□ -0.63
COL27A1-204ENST00000477421 SLC2A6Q9UGQ3 507 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms